PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

2101
Candidate Protein Records
1832
Pathway-Level Records
4504
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Agluscaffold4143_cov670238450 Steroid CYP90D1 low borderline
Agluscaffold424545_cov1020251400 Steroid CYP90D1 low borderline
Agluscaffold425108_cov940265170 Steroid CYP90D1 low borderline
Agluscaffold42569_cov1020274490 Steroid CYP90D1 low borderline
Agluscaffold42569_cov1020274510 Steroid CYP90D1 low borderline
Agluscaffold427956_cov730281040 Steroid CYP90D1 medium borderline
Agluscaffold4556_cov1050290630 Steroid CYP90D1 low borderline
Agluscaffold4556_cov1050290670 Steroid CYP90D1 low borderline
Agluscaffold46329_cov1090295400 Steroid CYP90D1 low borderline
Agluscaffold48160_cov770303140 Steroid CYP90D1 medium pass
Agluscaffold5462_cov830325920 Steroid CYP90D1 low borderline
Agluscaffold5802_cov950337200 Steroid CYP90D1 low borderline
Agluscaffold5802_cov950337210 Steroid CYP90D1 low borderline
Agluscaffold7295_cov920377890 Steroid CYP90D1 low borderline
Agluscaffold7557_cov1030385200 Steroid CYP90D1 low borderline
Agluscaffold7698_cov720387810 Steroid CYP90D1 medium borderline
Agluscaffold80900_cov1000396510 Steroid CYP90D1 medium borderline
Agluscaffold855_cov990406940 Steroid CYP90D1 medium borderline
Agluscaffold9245_cov1050419980 Steroid CYP90D1 low borderline
Agluscaffold9245_cov1050419990 Steroid CYP90D1 low borderline
Agluscaffold9741_cov910427710 Steroid CYP90D1 low borderline
Agluscaffold11747_cov930029490 Steroid DET2 low borderline
Agluscaffold166299_cov940086850 Steroid DET2 low borderline
Agluscaffold23029_cov1000142570 Steroid DET2 low borderline
Agluscaffold23693_cov840146200 Steroid DET2 medium pass
Agluscaffold5693_cov1290334290 Steroid DET2 medium pass
Agluscaffold3545_cov1010212580 Steroid DWF1 medium pass
Agluscaffold5072_cov1050313740 Steroid DWF1 medium pass
Agluscaffold10445_cov860009820 Steroid DWF4/CYP90B1 low borderline
Agluscaffold11507_cov1050024810 Steroid DWF4/CYP90B1 low borderline
Agluscaffold11730_cov1060029340 Steroid DWF4/CYP90B1 low borderline
Agluscaffold11730_cov1060029350 Steroid DWF4/CYP90B1 low borderline
Agluscaffold12380_cov1080037180 Steroid DWF4/CYP90B1 low borderline
Agluscaffold12576_cov940039290 Steroid DWF4/CYP90B1 low borderline
Agluscaffold1270_cov1060041370 Steroid DWF4/CYP90B1 low borderline
Agluscaffold13340_cov1000049900 Steroid DWF4/CYP90B1 low borderline
Agluscaffold13506_cov1020051090 Steroid DWF4/CYP90B1 low borderline
Agluscaffold1395_cov1040057980 Steroid DWF4/CYP90B1 low borderline
Agluscaffold1518_cov1050071490 Steroid DWF4/CYP90B1 low borderline
Agluscaffold15599_cov830074670 Steroid DWF4/CYP90B1 low borderline
Agluscaffold16107_cov1070080930 Steroid DWF4/CYP90B1 low borderline
Agluscaffold16107_cov1070080940 Steroid DWF4/CYP90B1 low borderline
Agluscaffold16347_cov980083780 Steroid DWF4/CYP90B1 low borderline
Agluscaffold16596_cov810086490 Steroid DWF4/CYP90B1 low borderline
Agluscaffold1687_cov930088530 Steroid DWF4/CYP90B1 low borderline
Agluscaffold17599_cov1060095210 Steroid DWF4/CYP90B1 low borderline
Agluscaffold17652_cov1040096300 Steroid DWF4/CYP90B1 low borderline
Agluscaffold17652_cov1040096310 Steroid DWF4/CYP90B1 low borderline
Agluscaffold18477_cov990102860 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold19026_cov1000106820 Steroid DWF4/CYP90B1 low borderline