PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
alnus_rubra_ALNRU00041141-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00041146-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00041148-RA Steroid DWF4/CYP90B1 medium borderline
alnus_rubra_ALNRU00041212-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00041523-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00041527-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00041537-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00041543-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00042427-RA Steroid DWF4/CYP90B1 medium borderline
alnus_rubra_ALNRU00044013-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00047041-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00047973-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00047993-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00048010-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00048024-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00048056-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00048064-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00049016-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00049962-RA Steroid DWF4/CYP90B1 medium borderline
alnus_rubra_ALNRU00064292-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00064311-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00064668-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00064673-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00070206-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00070223-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00070227-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00072252-RA Steroid DWF4/CYP90B1 medium borderline
alnus_rubra_ALNRU00072988-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00073171-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00074000-RA Steroid DWF4/CYP90B1 medium borderline
alnus_rubra_ALNRU00089156-RA Steroid DWF4/CYP90B1 medium borderline
alnus_rubra_ALNRU00090402-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00091716-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00093895-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00094835-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00098084-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00098087-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00103016-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00104917-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00104929-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00104970-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00104989-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00104993-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00106696-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00106705-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00106719-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00110280-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00111590-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00119461-RA Steroid DWF4/CYP90B1 low borderline
alnus_rubra_ALNRU00121229-RA Steroid DWF4/CYP90B1 low borderline