PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

2075
Candidate Protein Records
1961
Pathway-Level Records
4369
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
alnus_rubra_ALNRU00005808-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00010204-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00010208-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00010214-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00011109-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00012147-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00012154-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00014663-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00014667-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00014681-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00014699-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00015020-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00015031-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00028207-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00028918-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00031790-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00032849-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00032935-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00034305-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00034306-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00034540-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00035364-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00038274-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00041657-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00041669-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00044165-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00045783-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00054443-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00062711-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00065523-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00065576-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00065587-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00071474-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00071475-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00073283-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00073382-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00073797-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00079005-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00084357-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00089541-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00092785-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00097692-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00098295-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00106496-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00114579-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00114832-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00114901-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00114908-RA Steroid SMT1/SMT2/SMT3 medium pass
alnus_rubra_ALNRU00120330-RA Steroid SMT1/SMT2/SMT3 low borderline
alnus_rubra_ALNRU00120335-RA Steroid SMT1/SMT2/SMT3 low borderline