PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
XP_010489393.1 Phenylpropanoid 4CL medium pass
XP_010492518.1 Phenylpropanoid 4CL medium pass
XP_010492519.1 Phenylpropanoid 4CL medium pass
XP_010492530.1 Phenylpropanoid 4CL medium pass
XP_010492532.1 Phenylpropanoid 4CL medium pass
XP_010492534.1 Phenylpropanoid 4CL medium pass
XP_010492535.1 Phenylpropanoid 4CL medium pass
XP_010492536.1 Phenylpropanoid 4CL medium pass
XP_010493998.1 Phenylpropanoid 4CL low borderline
XP_010494557.1 Phenylpropanoid 4CL medium pass
XP_010496337.1 Phenylpropanoid 4CL medium pass
XP_010498481.1 Phenylpropanoid 4CL medium pass
XP_010498483.1 Phenylpropanoid 4CL medium pass
XP_010498484.1 Phenylpropanoid 4CL medium pass
XP_010498489.1 Phenylpropanoid 4CL medium pass
XP_010498606.1 Phenylpropanoid 4CL medium pass
XP_010500746.1 Phenylpropanoid 4CL medium pass
XP_010500747.1 Phenylpropanoid 4CL medium pass
XP_010503546.1 Phenylpropanoid 4CL medium pass
XP_010503906.1 Phenylpropanoid 4CL low borderline
XP_010506755.1 Phenylpropanoid 4CL low borderline
XP_010506756.1 Phenylpropanoid 4CL low borderline
XP_010506757.1 Phenylpropanoid 4CL low borderline
XP_010506758.1 Phenylpropanoid 4CL low borderline
XP_010506759.1 Phenylpropanoid 4CL low borderline
XP_010507915.1 Phenylpropanoid 4CL low borderline
XP_010507916.1 Phenylpropanoid 4CL low borderline
XP_010509953.1 Phenylpropanoid 4CL medium pass
XP_010509987.1 Phenylpropanoid 4CL medium pass
XP_010511390.1 Phenylpropanoid 4CL medium pass
XP_010511392.1 Phenylpropanoid 4CL medium pass
XP_010511510.1 Phenylpropanoid 4CL medium pass
XP_010511511.1 Phenylpropanoid 4CL medium pass
XP_010512892.1 Phenylpropanoid 4CL low borderline
XP_010512900.1 Phenylpropanoid 4CL low borderline
XP_010513562.1 Phenylpropanoid 4CL medium pass
XP_010514519.1 Phenylpropanoid 4CL low borderline
XP_010514759.1 Phenylpropanoid 4CL medium pass
XP_010515235.1 Phenylpropanoid 4CL medium pass
XP_010516957.1 Phenylpropanoid 4CL low borderline
XP_010518417.1 Phenylpropanoid 4CL low borderline
XP_010518419.1 Phenylpropanoid 4CL low borderline
XP_019083714.1 Phenylpropanoid 4CL medium pass
XP_019084195.1 Phenylpropanoid 4CL medium pass
XP_019087462.1 Phenylpropanoid 4CL low borderline
XP_019087993.1 Phenylpropanoid 4CL medium pass
XP_019090788.1 Phenylpropanoid 4CL medium pass
XP_019090904.1 Phenylpropanoid 4CL medium pass
XP_019090935.1 Phenylpropanoid 4CL medium pass
XP_019091722.1 Phenylpropanoid 4CL medium pass