PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
XP_010419106.2 Flavonoid PAL high pass
XP_010426963.1 Flavonoid PAL high pass
XP_010463700.1 Flavonoid PAL low borderline
XP_010464706.1 Flavonoid PAL high pass
XP_010482945.1 Flavonoid PAL high pass
XP_010485605.1 Flavonoid PAL low borderline
XP_010501216.1 Flavonoid PAL low borderline
XP_010504083.1 Flavonoid PAL high pass
XP_010505261.1 Flavonoid PAL high pass
XP_010509401.1 Flavonoid PAL high pass
XP_010513426.1 Flavonoid PAL medium pass
XP_010515816.1 Flavonoid PAL high pass
XP_010516949.1 Flavonoid PAL high pass
XP_019089011.1 Flavonoid PAL low borderline
XP_019098682.1 Flavonoid PAL medium pass
XP_010419106.2 Phenylpropanoid PAL high pass
XP_010426963.1 Phenylpropanoid PAL high pass
XP_010463700.1 Phenylpropanoid PAL low borderline
XP_010464706.1 Phenylpropanoid PAL high pass
XP_010482945.1 Phenylpropanoid PAL high pass
XP_010485605.1 Phenylpropanoid PAL low borderline
XP_010501216.1 Phenylpropanoid PAL low borderline
XP_010504083.1 Phenylpropanoid PAL high pass
XP_010505261.1 Phenylpropanoid PAL high pass
XP_010509401.1 Phenylpropanoid PAL high pass
XP_010513426.1 Phenylpropanoid PAL medium pass
XP_010515816.1 Phenylpropanoid PAL high pass
XP_010516949.1 Phenylpropanoid PAL high pass
XP_019089011.1 Phenylpropanoid PAL low borderline
XP_019098682.1 Phenylpropanoid PAL medium pass
XP_010419106.2 Rosmarinic Acid PAL high pass
XP_010426963.1 Rosmarinic Acid PAL high pass
XP_010463700.1 Rosmarinic Acid PAL low borderline
XP_010464706.1 Rosmarinic Acid PAL high pass
XP_010482945.1 Rosmarinic Acid PAL high pass
XP_010485605.1 Rosmarinic Acid PAL low borderline
XP_010501216.1 Rosmarinic Acid PAL low borderline
XP_010504083.1 Rosmarinic Acid PAL high pass
XP_010505261.1 Rosmarinic Acid PAL high pass
XP_010509401.1 Rosmarinic Acid PAL high pass
XP_010513426.1 Rosmarinic Acid PAL medium pass
XP_010515816.1 Rosmarinic Acid PAL high pass
XP_010516949.1 Rosmarinic Acid PAL high pass
XP_019089011.1 Rosmarinic Acid PAL low borderline
XP_019098682.1 Rosmarinic Acid PAL medium pass