PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
XP_010416031.1 Alkaloid GS high pass
XP_010416928.1 Alkaloid GS high pass
XP_010416929.1 Alkaloid GS high pass
XP_010426005.1 Alkaloid GS low borderline
XP_010427472.1 Alkaloid GS low borderline
XP_010428161.1 Alkaloid GS high pass
XP_010429094.1 Alkaloid GS high pass
XP_010431900.1 Alkaloid GS high pass
XP_010432007.1 Alkaloid GS high pass
XP_010432010.1 Alkaloid GS high pass
XP_010432011.1 Alkaloid GS high pass
XP_010432445.1 Alkaloid GS high pass
XP_010434158.1 Alkaloid GS low borderline
XP_010435318.1 Alkaloid GS low borderline
XP_010437051.1 Alkaloid GS high pass
XP_010437162.1 Alkaloid GS high pass
XP_010437652.1 Alkaloid GS high pass
XP_010439453.1 Alkaloid GS low borderline
XP_010440641.1 Alkaloid GS low borderline
XP_010440987.1 Alkaloid GS low borderline
XP_010442710.1 Alkaloid GS medium pass
XP_010443971.1 Alkaloid GS low borderline
XP_010444191.1 Alkaloid GS medium pass
XP_010444235.1 Alkaloid GS medium pass
XP_010444275.1 Alkaloid GS medium pass
XP_010446472.1 Alkaloid GS high pass
XP_010446601.1 Alkaloid GS high pass
XP_010446602.1 Alkaloid GS high pass
XP_010446604.1 Alkaloid GS high pass
XP_010446605.1 Alkaloid GS high pass
XP_010447117.1 Alkaloid GS high pass
XP_010449035.1 Alkaloid GS low borderline
XP_010450263.1 Alkaloid GS low borderline
XP_010450880.1 Alkaloid GS low borderline
XP_010457409.1 Alkaloid GS low borderline
XP_010460148.1 Alkaloid GS low borderline
XP_010460818.1 Alkaloid GS medium pass
XP_010465450.1 Alkaloid GS low borderline
XP_010466090.1 Alkaloid GS high pass
XP_010471299.1 Alkaloid GS high pass
XP_010472167.1 Alkaloid GS high pass
XP_010472168.1 Alkaloid GS high pass
XP_010477676.1 Alkaloid GS low borderline
XP_010482545.1 Alkaloid GS medium pass
XP_010483823.1 Alkaloid GS low borderline
XP_010484117.1 Alkaloid GS medium pass
XP_010487324.2 Alkaloid GS low borderline
XP_010487889.1 Alkaloid GS high pass
XP_010498879.1 Alkaloid GS low borderline
XP_010502474.1 Alkaloid GS low borderline