PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
XP_010416639.1 Alkaloid 8HGO medium borderline
XP_010421318.1 Alkaloid 8HGO medium borderline
XP_010421319.1 Alkaloid 8HGO medium borderline
XP_010421472.1 Alkaloid 8HGO low borderline
XP_010425256.1 Alkaloid 8HGO low borderline
XP_010427370.1 Alkaloid 8HGO low borderline
XP_010430620.1 Alkaloid 8HGO medium borderline
XP_010431542.1 Alkaloid 8HGO medium borderline
XP_010441927.1 Alkaloid 8HGO medium borderline
XP_010442151.1 Alkaloid 8HGO medium borderline
XP_010448937.1 Alkaloid 8HGO medium borderline
XP_010454800.1 Alkaloid 8HGO medium borderline
XP_010459996.1 Alkaloid 8HGO medium borderline
XP_010459997.1 Alkaloid 8HGO medium borderline
XP_010461094.1 Alkaloid 8HGO medium borderline
XP_010461095.1 Alkaloid 8HGO medium borderline
XP_010471899.1 Alkaloid 8HGO medium borderline
XP_010473736.1 Alkaloid 8HGO medium borderline
XP_010477502.1 Alkaloid 8HGO medium borderline
XP_010477503.1 Alkaloid 8HGO medium borderline
XP_010478698.1 Alkaloid 8HGO medium borderline
XP_010481795.1 Alkaloid 8HGO medium borderline
XP_010482004.1 Alkaloid 8HGO medium borderline
XP_010493721.1 Alkaloid 8HGO medium borderline
XP_010493867.1 Alkaloid 8HGO medium borderline
XP_010494387.1 Alkaloid 8HGO medium borderline
XP_010496632.1 Alkaloid 8HGO medium borderline
XP_010498711.1 Alkaloid 8HGO medium borderline
XP_010498712.1 Alkaloid 8HGO medium borderline
XP_010499820.1 Alkaloid 8HGO medium borderline
XP_010504446.1 Alkaloid 8HGO low borderline
XP_010504447.1 Alkaloid 8HGO low borderline
XP_010505685.1 Alkaloid 8HGO low borderline
XP_010505686.1 Alkaloid 8HGO low borderline
XP_010508950.1 Alkaloid 8HGO low borderline
XP_010509865.1 Alkaloid 8HGO medium borderline
XP_010514223.1 Alkaloid 8HGO low borderline
XP_010516165.1 Alkaloid 8HGO low borderline
XP_019086399.1 Alkaloid 8HGO medium pass
XP_019087366.1 Alkaloid 8HGO medium borderline
XP_019094256.1 Alkaloid 8HGO medium borderline
XP_019096439.1 Alkaloid 8HGO low borderline
XP_019097205.1 Alkaloid 8HGO medium borderline
XP_019098268.1 Alkaloid 8HGO medium borderline
XP_019098468.1 Alkaloid 8HGO medium borderline
XP_019098660.1 Alkaloid 8HGO medium pass
XP_019102549.1 Alkaloid 8HGO low borderline