PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
XP_010412751.2 Steroid CPD/CYP90A1 medium borderline
XP_010414441.1 Steroid CPD/CYP90A1 medium borderline
XP_010423121.1 Steroid CPD/CYP90A1 medium borderline
XP_010426348.1 Steroid CPD/CYP90A1 low borderline
XP_010426945.1 Steroid CPD/CYP90A1 medium borderline
XP_010426966.1 Steroid CPD/CYP90A1 medium borderline
XP_010426967.1 Steroid CPD/CYP90A1 medium borderline
XP_010431317.2 Steroid CPD/CYP90A1 medium borderline
XP_010432063.1 Steroid CPD/CYP90A1 low borderline
XP_010432066.1 Steroid CPD/CYP90A1 medium borderline
XP_010432067.1 Steroid CPD/CYP90A1 medium borderline
XP_010432068.1 Steroid CPD/CYP90A1 medium borderline
XP_010436205.1 Steroid CPD/CYP90A1 low borderline
XP_010437237.1 Steroid CPD/CYP90A1 medium borderline
XP_010437239.1 Steroid CPD/CYP90A1 medium borderline
XP_010440783.1 Steroid CPD/CYP90A1 medium borderline
XP_010442700.1 Steroid CPD/CYP90A1 low borderline
XP_010444065.1 Steroid CPD/CYP90A1 low borderline
XP_010444242.1 Steroid CPD/CYP90A1 low borderline
XP_010445034.2 Steroid CPD/CYP90A1 low borderline
XP_010446670.1 Steroid CPD/CYP90A1 medium borderline
XP_010446677.1 Steroid CPD/CYP90A1 medium borderline
XP_010446678.2 Steroid CPD/CYP90A1 medium borderline
XP_010450437.1 Steroid CPD/CYP90A1 medium borderline
XP_010458666.1 Steroid CPD/CYP90A1 low borderline
XP_010459397.1 Steroid CPD/CYP90A1 low borderline
XP_010460278.1 Steroid CPD/CYP90A1 low borderline
XP_010469993.1 Steroid CPD/CYP90A1 medium borderline
XP_010470317.1 Steroid CPD/CYP90A1 low borderline
XP_010476208.1 Steroid CPD/CYP90A1 low borderline
XP_010476947.1 Steroid CPD/CYP90A1 low borderline
XP_010484081.1 Steroid CPD/CYP90A1 low borderline
XP_010488628.1 Steroid CPD/CYP90A1 low borderline
XP_010494107.1 Steroid CPD/CYP90A1 low borderline
XP_010498161.1 Steroid CPD/CYP90A1 low borderline
XP_010503490.1 Steroid CPD/CYP90A1 low borderline
XP_010504071.1 Steroid CPD/CYP90A1 medium borderline
XP_010506464.1 Steroid CPD/CYP90A1 low borderline
XP_010506717.1 Steroid CPD/CYP90A1 low borderline
XP_010513989.1 Steroid CPD/CYP90A1 low borderline
XP_010515172.1 Steroid CPD/CYP90A1 low borderline
XP_010515801.1 Steroid CPD/CYP90A1 medium borderline
XP_010515817.1 Steroid CPD/CYP90A1 medium borderline
XP_019082414.1 Steroid CPD/CYP90A1 low borderline
XP_019089733.1 Steroid CPD/CYP90A1 medium borderline
XP_019096707.1 Steroid CPD/CYP90A1 low borderline
XP_019100308.1 Steroid CPD/CYP90A1 medium borderline
XP_019102327.1 Steroid CPD/CYP90A1 medium borderline