PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
XP_010415708.1 Alkaloid PMT medium borderline
XP_010417391.1 Alkaloid PMT medium pass
XP_010420759.1 Alkaloid PMT medium pass
XP_010427802.1 Alkaloid PMT medium borderline
XP_010429628.1 Alkaloid PMT medium pass
XP_010433760.1 Alkaloid PMT low borderline
XP_010439020.1 Alkaloid PMT low borderline
XP_010442869.1 Alkaloid PMT medium borderline
XP_010443617.1 Alkaloid PMT low borderline
XP_010445566.1 Alkaloid PMT medium borderline
XP_010448555.1 Alkaloid PMT low borderline
XP_010454235.1 Alkaloid PMT medium pass
XP_010460158.2 Alkaloid PMT medium borderline
XP_010462493.1 Alkaloid PMT low borderline
XP_010471027.1 Alkaloid PMT medium borderline
XP_010477685.1 Alkaloid PMT medium borderline
XP_010479238.1 Alkaloid PMT low borderline
XP_010479239.1 Alkaloid PMT low borderline
XP_010479240.1 Alkaloid PMT low borderline
XP_010480194.1 Alkaloid PMT low borderline
XP_010482696.1 Alkaloid PMT medium borderline
XP_010482697.1 Alkaloid PMT medium borderline
XP_010485336.1 Alkaloid PMT low borderline
XP_010493025.1 Alkaloid PMT medium pass
XP_010498889.1 Alkaloid PMT medium borderline
XP_010500344.1 Alkaloid PMT low borderline
XP_010500346.1 Alkaloid PMT low borderline
XP_010501253.1 Alkaloid PMT low borderline
XP_019083278.1 Alkaloid PMT medium borderline
XP_019091488.1 Alkaloid PMT medium borderline