PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: MPO
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Gene Pathway Family Confidence Status
XP_010418280.1 Alkaloid MPO medium pass
XP_010422197.1 Alkaloid MPO medium pass
XP_010422198.1 Alkaloid MPO medium pass
XP_010430357.1 Alkaloid MPO medium pass
XP_010434239.1 Alkaloid MPO medium pass
XP_010434999.1 Alkaloid MPO medium pass
XP_010440372.1 Alkaloid MPO medium pass
XP_010449967.1 Alkaloid MPO medium pass
XP_010455667.1 Alkaloid MPO medium pass
XP_010460986.1 Alkaloid MPO medium pass
XP_010460990.1 Alkaloid MPO medium pass
XP_010470771.1 Alkaloid MPO low borderline
XP_010470772.1 Alkaloid MPO low borderline
XP_010473504.1 Alkaloid MPO medium pass
XP_010478584.1 Alkaloid MPO medium pass
XP_010478585.1 Alkaloid MPO medium pass
XP_010480808.1 Alkaloid MPO medium pass
XP_010496673.1 Alkaloid MPO low borderline
XP_010506075.1 Alkaloid MPO high pass
XP_010506076.1 Alkaloid MPO high pass
XP_010508564.1 Alkaloid MPO high pass
XP_010517774.1 Alkaloid MPO high pass
XP_019082342.1 Alkaloid MPO high pass
XP_019084088.1 Alkaloid MPO medium pass
XP_019084089.1 Alkaloid MPO medium pass
XP_019091743.1 Alkaloid MPO medium pass
XP_019100581.1 Alkaloid MPO high pass