PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
NP_001289920.1 Alkaloid T3O medium pass
XP_010412751.2 Alkaloid T3O medium borderline
XP_010413500.1 Alkaloid T3O medium borderline
XP_010413993.1 Alkaloid T3O medium pass
XP_010413994.1 Alkaloid T3O medium pass
XP_010416244.1 Alkaloid T3O medium borderline
XP_010416312.1 Alkaloid T3O medium borderline
XP_010416315.1 Alkaloid T3O medium borderline
XP_010417842.1 Alkaloid T3O medium borderline
XP_010419186.2 Alkaloid T3O medium borderline
XP_010419280.1 Alkaloid T3O medium borderline
XP_010419577.1 Alkaloid T3O low borderline
XP_010419579.1 Alkaloid T3O low borderline
XP_010420076.2 Alkaloid T3O low borderline
XP_010421118.1 Alkaloid T3O medium pass
XP_010421362.1 Alkaloid T3O medium borderline
XP_010421364.1 Alkaloid T3O medium borderline
XP_010421365.1 Alkaloid T3O medium borderline
XP_010421801.1 Alkaloid T3O medium borderline
XP_010422199.1 Alkaloid T3O medium borderline
XP_010422200.1 Alkaloid T3O medium borderline
XP_010422201.1 Alkaloid T3O medium borderline
XP_010423121.1 Alkaloid T3O low borderline
XP_010423152.1 Alkaloid T3O medium borderline
XP_010423443.1 Alkaloid T3O medium pass
XP_010423591.1 Alkaloid T3O medium borderline
XP_010425289.1 Alkaloid T3O medium borderline
XP_010425290.1 Alkaloid T3O medium borderline
XP_010425291.1 Alkaloid T3O medium borderline
XP_010425292.1 Alkaloid T3O medium borderline
XP_010425318.1 Alkaloid T3O medium borderline
XP_010425327.1 Alkaloid T3O medium borderline
XP_010425328.1 Alkaloid T3O medium borderline
XP_010425348.1 Alkaloid T3O medium borderline
XP_010425349.1 Alkaloid T3O medium borderline
XP_010425350.1 Alkaloid T3O medium borderline
XP_010425351.1 Alkaloid T3O medium borderline
XP_010425352.1 Alkaloid T3O medium borderline
XP_010425407.1 Alkaloid T3O medium borderline
XP_010425700.1 Alkaloid T3O medium pass
XP_010425702.1 Alkaloid T3O medium pass
XP_010425706.1 Alkaloid T3O medium pass
XP_010425768.1 Alkaloid T3O medium pass
XP_010426318.1 Alkaloid T3O medium borderline
XP_010426321.1 Alkaloid T3O medium borderline
XP_010426348.1 Alkaloid T3O low borderline
XP_010426966.1 Alkaloid T3O medium borderline
XP_010426967.1 Alkaloid T3O medium borderline
XP_010428380.1 Alkaloid T3O medium borderline
XP_010428976.1 Alkaloid T3O medium pass