PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
XP_010412870.1 Steroid DWF4/CYP90B1 low borderline
XP_010413500.1 Steroid DWF4/CYP90B1 low borderline
XP_010414809.1 Steroid DWF4/CYP90B1 low borderline
XP_010415197.1 Steroid DWF4/CYP90B1 low borderline
XP_010415198.1 Steroid DWF4/CYP90B1 low borderline
XP_010415594.1 Steroid DWF4/CYP90B1 low borderline
XP_010416312.1 Steroid DWF4/CYP90B1 low borderline
XP_010416315.1 Steroid DWF4/CYP90B1 low borderline
XP_010418988.1 Steroid DWF4/CYP90B1 low borderline
XP_010419020.1 Steroid DWF4/CYP90B1 low borderline
XP_010419280.1 Steroid DWF4/CYP90B1 low borderline
XP_010420076.2 Steroid DWF4/CYP90B1 medium borderline
XP_010421364.1 Steroid DWF4/CYP90B1 low borderline
XP_010421365.1 Steroid DWF4/CYP90B1 low borderline
XP_010421446.1 Steroid DWF4/CYP90B1 low borderline
XP_010421447.1 Steroid DWF4/CYP90B1 low borderline
XP_010421803.1 Steroid DWF4/CYP90B1 low borderline
XP_010423152.1 Steroid DWF4/CYP90B1 low borderline
XP_010424746.1 Steroid DWF4/CYP90B1 low borderline
XP_010425289.1 Steroid DWF4/CYP90B1 low borderline
XP_010425290.1 Steroid DWF4/CYP90B1 low borderline
XP_010425292.1 Steroid DWF4/CYP90B1 low borderline
XP_010425318.1 Steroid DWF4/CYP90B1 low borderline
XP_010425326.2 Steroid DWF4/CYP90B1 low borderline
XP_010425327.1 Steroid DWF4/CYP90B1 low borderline
XP_010425328.1 Steroid DWF4/CYP90B1 low borderline
XP_010425348.1 Steroid DWF4/CYP90B1 low borderline
XP_010425349.1 Steroid DWF4/CYP90B1 low borderline
XP_010425350.1 Steroid DWF4/CYP90B1 low borderline
XP_010425351.1 Steroid DWF4/CYP90B1 low borderline
XP_010425352.1 Steroid DWF4/CYP90B1 low borderline
XP_010425654.1 Steroid DWF4/CYP90B1 low borderline
XP_010425700.1 Steroid DWF4/CYP90B1 medium borderline
XP_010425768.1 Steroid DWF4/CYP90B1 medium borderline
XP_010426317.1 Steroid DWF4/CYP90B1 low borderline
XP_010429264.1 Steroid DWF4/CYP90B1 low borderline
XP_010429265.1 Steroid DWF4/CYP90B1 low borderline
XP_010429385.1 Steroid DWF4/CYP90B1 low borderline
XP_010430758.1 Steroid DWF4/CYP90B1 low borderline
XP_010431310.1 Steroid DWF4/CYP90B1 low borderline
XP_010432764.1 Steroid DWF4/CYP90B1 low borderline
XP_010435747.1 Steroid DWF4/CYP90B1 low borderline
XP_010435805.1 Steroid DWF4/CYP90B1 medium borderline
XP_010437233.1 Steroid DWF4/CYP90B1 low borderline
XP_010437945.1 Steroid DWF4/CYP90B1 low borderline
XP_010437977.1 Steroid DWF4/CYP90B1 low borderline
XP_010440785.1 Steroid DWF4/CYP90B1 low borderline
XP_010440788.1 Steroid DWF4/CYP90B1 low borderline
XP_010441026.1 Steroid DWF4/CYP90B1 medium borderline
XP_010441027.1 Steroid DWF4/CYP90B1 medium borderline