PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: MCT/IspD
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Gene Pathway Family Confidence Status
XP_010413361.1 Terpenoid MCT/IspD low borderline
XP_010413406.1 Terpenoid MCT/IspD low borderline
XP_010413417.1 Terpenoid MCT/IspD low borderline
XP_010425029.1 Terpenoid MCT/IspD high pass
XP_010427670.1 Terpenoid MCT/IspD low borderline
XP_010436430.1 Terpenoid MCT/IspD low borderline
XP_010442343.1 Terpenoid MCT/IspD low borderline
XP_010443744.1 Terpenoid MCT/IspD low borderline
XP_010449185.1 Terpenoid MCT/IspD low borderline
XP_010453091.1 Terpenoid MCT/IspD low borderline
XP_010453197.1 Terpenoid MCT/IspD low borderline
XP_010454861.1 Terpenoid MCT/IspD low borderline
XP_010456785.1 Terpenoid MCT/IspD low borderline
XP_010460915.1 Terpenoid MCT/IspD low borderline
XP_010461436.1 Terpenoid MCT/IspD low borderline
XP_010463945.1 Terpenoid MCT/IspD low borderline
XP_010463946.1 Terpenoid MCT/IspD low borderline
XP_010465486.1 Terpenoid MCT/IspD low borderline
XP_010472187.1 Terpenoid MCT/IspD low borderline
XP_010475143.1 Terpenoid MCT/IspD low borderline
XP_010475590.1 Terpenoid MCT/IspD low borderline
XP_010478549.1 Terpenoid MCT/IspD low borderline
XP_010483304.1 Terpenoid MCT/IspD low borderline
XP_010484147.1 Terpenoid MCT/IspD low borderline
XP_010492355.1 Terpenoid MCT/IspD low borderline
XP_010494047.1 Terpenoid MCT/IspD low borderline
XP_010499657.1 Terpenoid MCT/IspD low borderline
XP_010500888.1 Terpenoid MCT/IspD low borderline
XP_010502265.1 Terpenoid MCT/IspD high pass
XP_010504992.1 Terpenoid MCT/IspD low borderline
XP_010504993.1 Terpenoid MCT/IspD low borderline
XP_010504994.1 Terpenoid MCT/IspD low borderline
XP_010504996.1 Terpenoid MCT/IspD low borderline
XP_010507026.1 Terpenoid MCT/IspD low borderline
XP_010509675.1 Terpenoid MCT/IspD low borderline
XP_010509676.1 Terpenoid MCT/IspD low borderline
XP_010510469.1 Terpenoid MCT/IspD low borderline
XP_010512584.1 Terpenoid MCT/IspD low borderline
XP_010513883.1 Terpenoid MCT/IspD low borderline
XP_010514024.1 Terpenoid MCT/IspD high pass
XP_010514246.1 Terpenoid MCT/IspD low borderline
XP_010515394.1 Terpenoid MCT/IspD low borderline
XP_010516187.1 Terpenoid MCT/IspD low borderline
XP_010516671.1 Terpenoid MCT/IspD low borderline
XP_010516672.1 Terpenoid MCT/IspD low borderline
XP_019090401.1 Terpenoid MCT/IspD low borderline
XP_019094667.1 Terpenoid MCT/IspD low borderline
XP_019100447.1 Terpenoid MCT/IspD low borderline
XP_019102463.1 Terpenoid MCT/IspD low borderline