PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
NP_001306214.1 Flavonoid F3H medium borderline
XP_010412899.1 Flavonoid F3H medium borderline
XP_010413414.1 Flavonoid F3H medium borderline
XP_010413576.2 Flavonoid F3H medium borderline
XP_010414213.1 Flavonoid F3H medium borderline
XP_010416671.1 Flavonoid F3H medium borderline
XP_010416898.1 Flavonoid F3H medium borderline
XP_010417451.1 Flavonoid F3H medium borderline
XP_010417452.1 Flavonoid F3H medium borderline
XP_010417453.1 Flavonoid F3H medium borderline
XP_010417454.1 Flavonoid F3H medium borderline
XP_010418231.1 Flavonoid F3H medium borderline
XP_010419489.1 Flavonoid F3H medium borderline
XP_010419815.1 Flavonoid F3H medium borderline
XP_010419817.1 Flavonoid F3H medium borderline
XP_010419826.1 Flavonoid F3H medium borderline
XP_010420878.1 Flavonoid F3H medium borderline
XP_010421278.1 Flavonoid F3H medium borderline
XP_010421965.1 Flavonoid F3H medium borderline
XP_010423039.1 Flavonoid F3H medium borderline
XP_010423241.1 Flavonoid F3H medium borderline
XP_010423451.1 Flavonoid F3H medium borderline
XP_010426078.1 Flavonoid F3H low borderline
XP_010426079.1 Flavonoid F3H low borderline
XP_010426080.1 Flavonoid F3H low borderline
XP_010426081.1 Flavonoid F3H low borderline
XP_010426486.2 Flavonoid F3H low borderline
XP_010426562.1 Flavonoid F3H low borderline
XP_010426563.1 Flavonoid F3H low borderline
XP_010426669.1 Flavonoid F3H medium borderline
XP_010426670.1 Flavonoid F3H medium borderline
XP_010427401.1 Flavonoid F3H medium borderline
XP_010428810.1 Flavonoid F3H medium borderline
XP_010429681.1 Flavonoid F3H medium borderline
XP_010429980.1 Flavonoid F3H medium pass
XP_010430292.1 Flavonoid F3H medium borderline
XP_010433658.1 Flavonoid F3H medium borderline
XP_010433915.1 Flavonoid F3H medium pass
XP_010433976.1 Flavonoid F3H medium borderline
XP_010434144.1 Flavonoid F3H medium borderline
XP_010434210.1 Flavonoid F3H medium borderline
XP_010434846.1 Flavonoid F3H medium borderline
XP_010435699.1 Flavonoid F3H medium borderline
XP_010435700.1 Flavonoid F3H medium borderline
XP_010436386.1 Flavonoid F3H medium borderline
XP_010437037.1 Flavonoid F3H medium borderline
XP_010437070.1 Flavonoid F3H medium borderline
XP_010438884.1 Flavonoid F3H medium borderline
XP_010439185.1 Flavonoid F3H medium pass
XP_010439268.1 Flavonoid F3H medium borderline