PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status
XP_010414943.1 Flavonoid DFR low borderline
XP_010417131.1 Flavonoid DFR low borderline
XP_010421707.1 Flavonoid DFR medium borderline
XP_010425018.1 Flavonoid DFR medium pass
XP_010428708.1 Flavonoid DFR medium borderline
XP_010429343.1 Flavonoid DFR low borderline
XP_010432286.1 Flavonoid DFR medium borderline
XP_010437474.1 Flavonoid DFR medium borderline
XP_010446925.1 Flavonoid DFR medium borderline
XP_010455212.1 Flavonoid DFR medium borderline
XP_010460374.1 Flavonoid DFR medium pass
XP_010460375.1 Flavonoid DFR medium pass
XP_010467738.1 Flavonoid DFR low borderline
XP_010471046.1 Flavonoid DFR low borderline
XP_010472384.1 Flavonoid DFR low borderline
XP_010472385.1 Flavonoid DFR low borderline
XP_010472868.1 Flavonoid DFR medium borderline
XP_010474366.1 Flavonoid DFR low borderline
XP_010485758.1 Flavonoid DFR low borderline
XP_010494113.1 Flavonoid DFR medium borderline
XP_010494114.1 Flavonoid DFR medium borderline
XP_010497202.2 Flavonoid DFR low borderline
XP_010502253.1 Flavonoid DFR medium borderline
XP_010502429.1 Flavonoid DFR low borderline
XP_010507752.1 Flavonoid DFR medium borderline
XP_010514011.1 Flavonoid DFR medium borderline
XP_010514015.1 Flavonoid DFR medium borderline
XP_010514171.1 Flavonoid DFR low borderline
XP_019083893.1 Flavonoid DFR medium borderline
XP_019090428.1 Flavonoid DFR medium borderline
XP_019091241.1 Flavonoid DFR medium pass
XP_019092777.1 Flavonoid DFR medium pass
XP_019092778.1 Flavonoid DFR medium pass
XP_019094779.1 Flavonoid DFR medium borderline
XP_019094780.1 Flavonoid DFR medium borderline
XP_019095969.1 Flavonoid DFR low borderline
XP_019097334.1 Flavonoid DFR medium borderline
XP_019100051.1 Flavonoid DFR low borderline