PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SQE
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Gene Pathway Family Confidence Status
XP_010417041.1 Steroid SQE medium pass
XP_010417043.1 Steroid SQE medium pass
XP_010421225.1 Steroid SQE medium pass
XP_010421226.1 Steroid SQE medium pass
XP_010421228.1 Steroid SQE medium pass
XP_010421231.1 Steroid SQE medium pass
XP_010430889.1 Steroid SQE low borderline
XP_010432033.1 Steroid SQE medium pass
XP_010434921.1 Steroid SQE low borderline
XP_010436561.1 Steroid SQE low borderline
XP_010437188.1 Steroid SQE medium pass
XP_010440251.1 Steroid SQE low borderline
XP_010446627.1 Steroid SQE medium pass
XP_010449893.1 Steroid SQE low borderline
XP_010454706.1 Steroid SQE medium pass
XP_010454707.1 Steroid SQE medium pass
XP_010454708.1 Steroid SQE medium pass
XP_010470253.1 Steroid SQE medium pass
XP_010472280.1 Steroid SQE medium pass
XP_010481041.1 Steroid SQE low borderline
XP_010493554.1 Steroid SQE medium pass
XP_010493555.1 Steroid SQE medium pass
XP_010495422.1 Steroid SQE medium pass
XP_010511069.1 Steroid SQE medium pass
XP_019083482.1 Steroid SQE medium pass
XP_019083483.1 Steroid SQE medium pass
XP_019083919.1 Steroid SQE medium pass
XP_019086269.1 Steroid SQE medium pass