PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
XP_010413167.1 Alkaloid H6H low borderline
XP_010413168.1 Alkaloid H6H low borderline
XP_010416671.1 Alkaloid H6H medium borderline
XP_010417796.1 Alkaloid H6H low borderline
XP_010418231.1 Alkaloid H6H medium borderline
XP_010419392.2 Alkaloid H6H low borderline
XP_010419826.1 Alkaloid H6H low borderline
XP_010423039.1 Alkaloid H6H medium borderline
XP_010426669.1 Alkaloid H6H high pass
XP_010426670.1 Alkaloid H6H high pass
XP_010427401.1 Alkaloid H6H medium borderline
XP_010428810.1 Alkaloid H6H medium borderline
XP_010429979.1 Alkaloid H6H low borderline
XP_010430067.1 Alkaloid H6H low borderline
XP_010431071.1 Alkaloid H6H low borderline
XP_010433915.1 Alkaloid H6H low borderline
XP_010434144.1 Alkaloid H6H medium pass
XP_010439185.1 Alkaloid H6H low borderline
XP_010439443.1 Alkaloid H6H medium pass
XP_010442019.1 Alkaloid H6H medium borderline
XP_010444232.2 Alkaloid H6H low borderline
XP_010444263.1 Alkaloid H6H medium borderline
XP_010444264.1 Alkaloid H6H medium pass
XP_010444265.1 Alkaloid H6H medium borderline
XP_010444266.1 Alkaloid H6H medium borderline
XP_010444269.1 Alkaloid H6H medium borderline
XP_010444270.1 Alkaloid H6H medium pass
XP_010444272.1 Alkaloid H6H medium pass
XP_010444273.1 Alkaloid H6H medium pass
XP_010444870.1 Alkaloid H6H medium borderline
XP_010446028.1 Alkaloid H6H low borderline
XP_010446254.1 Alkaloid H6H medium borderline
XP_010448718.1 Alkaloid H6H low borderline
XP_010449018.1 Alkaloid H6H medium pass
XP_010452878.1 Alkaloid H6H medium borderline
XP_010454772.1 Alkaloid H6H medium borderline
XP_010455020.1 Alkaloid H6H low borderline
XP_010457349.1 Alkaloid H6H medium borderline
XP_010457480.1 Alkaloid H6H medium pass
XP_010457796.1 Alkaloid H6H medium borderline
XP_010457797.1 Alkaloid H6H medium borderline
XP_010457799.1 Alkaloid H6H medium borderline
XP_010457800.1 Alkaloid H6H medium borderline
XP_010457801.1 Alkaloid H6H medium borderline
XP_010457804.1 Alkaloid H6H medium borderline
XP_010457805.1 Alkaloid H6H medium borderline
XP_010458888.1 Alkaloid H6H low borderline
XP_010458889.1 Alkaloid H6H low borderline
XP_010458892.1 Alkaloid H6H low borderline
XP_010458893.1 Alkaloid H6H low borderline