PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
NP_001289920.1 Steroid ROT3/CYP90C1 medium borderline
XP_010413993.1 Steroid ROT3/CYP90C1 medium borderline
XP_010413994.1 Steroid ROT3/CYP90C1 medium borderline
XP_010437232.1 Steroid ROT3/CYP90C1 medium borderline
XP_010437356.1 Steroid ROT3/CYP90C1 medium borderline
XP_010440983.1 Steroid ROT3/CYP90C1 low borderline
XP_010446664.1 Steroid ROT3/CYP90C1 medium borderline
XP_010451031.1 Steroid ROT3/CYP90C1 medium borderline
XP_010457592.1 Steroid ROT3/CYP90C1 medium borderline
XP_010469585.1 Steroid ROT3/CYP90C1 medium borderline
XP_010473544.1 Steroid ROT3/CYP90C1 medium borderline
XP_010475188.1 Steroid ROT3/CYP90C1 medium borderline
XP_010478960.2 Steroid ROT3/CYP90C1 low borderline
XP_010501803.2 Steroid ROT3/CYP90C1 low borderline
XP_010503731.1 Steroid ROT3/CYP90C1 medium borderline
XP_010510015.1 Steroid ROT3/CYP90C1 medium borderline
XP_010510016.1 Steroid ROT3/CYP90C1 medium borderline
XP_010511939.1 Steroid ROT3/CYP90C1 medium pass
XP_010515436.1 Steroid ROT3/CYP90C1 medium borderline
XP_019082974.1 Steroid ROT3/CYP90C1 medium borderline
XP_019082975.1 Steroid ROT3/CYP90C1 medium borderline
XP_019094098.1 Steroid ROT3/CYP90C1 medium borderline
XP_019096532.1 Steroid ROT3/CYP90C1 low borderline
XP_019101353.1 Steroid ROT3/CYP90C1 medium borderline