PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
Reset
Gene Pathway Family Confidence Status
XP_010413334.1 Alkaloid IO medium borderline
XP_010416994.1 Alkaloid IO medium pass
XP_010422915.1 Alkaloid IO medium borderline
XP_010423551.1 Alkaloid IO medium borderline
XP_010424745.1 Alkaloid IO medium borderline
XP_010429154.2 Alkaloid IO medium pass
XP_010431310.1 Alkaloid IO medium borderline
XP_010431975.1 Alkaloid IO medium pass
XP_010434302.1 Alkaloid IO low borderline
XP_010434982.1 Alkaloid IO low borderline
XP_010435498.1 Alkaloid IO medium borderline
XP_010437120.1 Alkaloid IO medium pass
XP_010439305.2 Alkaloid IO medium borderline
XP_010440306.1 Alkaloid IO low borderline
XP_010440307.1 Alkaloid IO low borderline
XP_010440785.1 Alkaloid IO medium borderline
XP_010441027.1 Alkaloid IO low borderline
XP_010442141.1 Alkaloid IO low borderline
XP_010444668.1 Alkaloid IO medium borderline
XP_010446562.1 Alkaloid IO medium pass
XP_010446588.1 Alkaloid IO medium pass
XP_010446589.1 Alkaloid IO medium pass
XP_010448860.1 Alkaloid IO medium borderline
XP_010450431.1 Alkaloid IO medium borderline
XP_010450846.1 Alkaloid IO low borderline
XP_010452364.1 Alkaloid IO medium borderline
XP_010452636.2 Alkaloid IO medium borderline
XP_010457158.1 Alkaloid IO medium borderline
XP_010458575.1 Alkaloid IO medium borderline
XP_010464733.1 Alkaloid IO medium borderline
XP_010469033.1 Alkaloid IO medium borderline
XP_010472222.1 Alkaloid IO high pass
XP_010472320.1 Alkaloid IO medium borderline
XP_010474708.1 Alkaloid IO medium borderline
XP_010474719.1 Alkaloid IO medium borderline
XP_010476102.1 Alkaloid IO medium borderline
XP_010476297.1 Alkaloid IO medium borderline
XP_010480461.1 Alkaloid IO medium borderline
XP_010480585.1 Alkaloid IO medium borderline
XP_010481971.1 Alkaloid IO low borderline
XP_010486076.1 Alkaloid IO medium borderline
XP_010486669.1 Alkaloid IO medium borderline
XP_010490980.1 Alkaloid IO medium borderline
XP_010491059.1 Alkaloid IO high pass
XP_010491275.1 Alkaloid IO medium borderline
XP_010491644.1 Alkaloid IO medium borderline
XP_010493161.1 Alkaloid IO medium borderline
XP_010494202.1 Alkaloid IO low borderline
XP_010501796.1 Alkaloid IO medium borderline
XP_010502995.1 Alkaloid IO low borderline