PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
XP_010414621.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010414623.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010423981.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
XP_010427047.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010444090.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_010451949.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
XP_010451950.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
XP_010458904.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_010470168.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010470169.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010483954.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_010490521.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
XP_010505374.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010505376.2 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010509274.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010509277.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010509278.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010509279.1 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
XP_010510986.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010510987.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010515893.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010517051.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010517052.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010517053.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010517054.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010517055.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_010517056.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_019100484.1 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
XP_019100485.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_019100486.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO