PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
XP_010449952.1 Alkaloid 7DLGT medium pass
XP_010450109.1 Alkaloid 7DLGT medium pass
XP_010450127.1 Alkaloid 7DLGT medium pass
XP_010450965.1 Alkaloid 7DLGT high pass
XP_010451029.1 Alkaloid 7DLGT low borderline
XP_010451161.1 Alkaloid 7DLGT low borderline
XP_010452230.2 Alkaloid 7DLGT low borderline
XP_010452495.1 Alkaloid 7DLGT high pass
XP_010452496.1 Alkaloid 7DLGT high pass
XP_010452499.1 Alkaloid 7DLGT high pass
XP_010453338.1 Alkaloid 7DLGT low borderline
XP_010453885.1 Alkaloid 7DLGT low borderline
XP_010455340.1 Alkaloid 7DLGT low borderline
XP_010455375.1 Alkaloid 7DLGT low borderline
XP_010455377.1 Alkaloid 7DLGT low borderline
XP_010456210.1 Alkaloid 7DLGT high pass
XP_010457132.1 Alkaloid 7DLGT medium pass
XP_010457643.1 Alkaloid 7DLGT medium pass
XP_010457662.1 Alkaloid 7DLGT low borderline
XP_010457690.1 Alkaloid 7DLGT medium pass
XP_010457891.1 Alkaloid 7DLGT medium pass
XP_010458385.1 Alkaloid 7DLGT low borderline
XP_010459988.1 Alkaloid 7DLGT medium pass
XP_010459992.1 Alkaloid 7DLGT high pass
XP_010459993.1 Alkaloid 7DLGT medium pass
XP_010459994.1 Alkaloid 7DLGT medium pass
XP_010460183.1 Alkaloid 7DLGT low borderline
XP_010461668.1 Alkaloid 7DLGT medium pass
XP_010461954.1 Alkaloid 7DLGT low borderline
XP_010463008.2 Alkaloid 7DLGT low borderline
XP_010463598.2 Alkaloid 7DLGT medium pass
XP_010464841.1 Alkaloid 7DLGT high pass
XP_010465056.1 Alkaloid 7DLGT medium pass
XP_010465677.1 Alkaloid 7DLGT medium pass
XP_010466403.1 Alkaloid 7DLGT low borderline
XP_010466433.1 Alkaloid 7DLGT low borderline
XP_010466436.1 Alkaloid 7DLGT medium pass
XP_010466437.1 Alkaloid 7DLGT low borderline
XP_010466442.1 Alkaloid 7DLGT medium pass
XP_010467065.1 Alkaloid 7DLGT low borderline
XP_010467302.1 Alkaloid 7DLGT low borderline
XP_010467417.1 Alkaloid 7DLGT low borderline
XP_010467418.1 Alkaloid 7DLGT low borderline
XP_010467854.1 Alkaloid 7DLGT medium pass
XP_010467858.1 Alkaloid 7DLGT medium pass
XP_010467862.1 Alkaloid 7DLGT medium pass
XP_010468373.1 Alkaloid 7DLGT low borderline
XP_010468740.1 Alkaloid 7DLGT low borderline
XP_010468794.1 Alkaloid 7DLGT low borderline
XP_010469678.1 Alkaloid 7DLGT medium pass