PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
XP_010469679.1 Alkaloid 7DLGT low borderline
XP_010469887.1 Alkaloid 7DLGT low borderline
XP_010469889.1 Alkaloid 7DLGT low borderline
XP_010469931.1 Alkaloid 7DLGT low borderline
XP_010470154.1 Alkaloid 7DLGT low borderline
XP_010471469.1 Alkaloid 7DLGT low borderline
XP_010472246.1 Alkaloid 7DLGT low borderline
XP_010472676.1 Alkaloid 7DLGT low borderline
XP_010473969.1 Alkaloid 7DLGT low borderline
XP_010474328.2 Alkaloid 7DLGT low borderline
XP_010474414.1 Alkaloid 7DLGT low borderline
XP_010475277.1 Alkaloid 7DLGT low borderline
XP_010475278.1 Alkaloid 7DLGT medium pass
XP_010475279.1 Alkaloid 7DLGT medium pass
XP_010475477.1 Alkaloid 7DLGT medium pass
XP_010475478.1 Alkaloid 7DLGT medium pass
XP_010475901.1 Alkaloid 7DLGT low borderline
XP_010477390.1 Alkaloid 7DLGT medium pass
XP_010477495.1 Alkaloid 7DLGT medium pass
XP_010477496.1 Alkaloid 7DLGT medium pass
XP_010477497.1 Alkaloid 7DLGT medium pass
XP_010477498.2 Alkaloid 7DLGT medium pass
XP_010477499.2 Alkaloid 7DLGT high pass
XP_010477734.1 Alkaloid 7DLGT medium pass
XP_010478469.1 Alkaloid 7DLGT low borderline
XP_010479272.1 Alkaloid 7DLGT medium pass
XP_010479520.1 Alkaloid 7DLGT low borderline
XP_010479583.1 Alkaloid 7DLGT low borderline
XP_010479587.1 Alkaloid 7DLGT low borderline
XP_010480357.1 Alkaloid 7DLGT medium pass
XP_010480928.1 Alkaloid 7DLGT medium pass
XP_010482257.1 Alkaloid 7DLGT low borderline
XP_010482258.1 Alkaloid 7DLGT low borderline
XP_010482808.1 Alkaloid 7DLGT low borderline
XP_010482811.1 Alkaloid 7DLGT low borderline
XP_010483599.1 Alkaloid 7DLGT medium pass
XP_010483600.1 Alkaloid 7DLGT high pass
XP_010485054.1 Alkaloid 7DLGT medium pass
XP_010485192.1 Alkaloid 7DLGT low borderline
XP_010485444.1 Alkaloid 7DLGT medium pass
XP_010487258.1 Alkaloid 7DLGT medium pass
XP_010487514.1 Alkaloid 7DLGT medium pass
XP_010487515.1 Alkaloid 7DLGT low borderline
XP_010488169.1 Alkaloid 7DLGT low borderline
XP_010488196.1 Alkaloid 7DLGT low borderline
XP_010488197.1 Alkaloid 7DLGT low borderline
XP_010488199.1 Alkaloid 7DLGT medium pass
XP_010488200.1 Alkaloid 7DLGT low borderline
XP_010488201.1 Alkaloid 7DLGT low borderline
XP_010488203.1 Alkaloid 7DLGT low borderline