PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
XP_010504433.1 Alkaloid 7DLGT high pass
XP_010504434.1 Alkaloid 7DLGT high pass
XP_010505225.1 Alkaloid 7DLGT medium pass
XP_010505226.1 Alkaloid 7DLGT low borderline
XP_010505227.1 Alkaloid 7DLGT low borderline
XP_010505248.1 Alkaloid 7DLGT low borderline
XP_010506284.1 Alkaloid 7DLGT low borderline
XP_010506285.1 Alkaloid 7DLGT low borderline
XP_010506286.1 Alkaloid 7DLGT low borderline
XP_010506287.1 Alkaloid 7DLGT low borderline
XP_010506288.1 Alkaloid 7DLGT low borderline
XP_010506987.1 Alkaloid 7DLGT low borderline
XP_010506988.1 Alkaloid 7DLGT low borderline
XP_010507250.1 Alkaloid 7DLGT medium pass
XP_010507375.1 Alkaloid 7DLGT low borderline
XP_010507583.1 Alkaloid 7DLGT high pass
XP_010508369.1 Alkaloid 7DLGT low borderline
XP_010509409.1 Alkaloid 7DLGT low borderline
XP_010509434.1 Alkaloid 7DLGT medium pass
XP_010509439.2 Alkaloid 7DLGT medium pass
XP_010509811.1 Alkaloid 7DLGT low borderline
XP_010510154.1 Alkaloid 7DLGT medium pass
XP_010510162.1 Alkaloid 7DLGT low borderline
XP_010510360.1 Alkaloid 7DLGT low borderline
XP_010510398.1 Alkaloid 7DLGT low borderline
XP_010510401.1 Alkaloid 7DLGT low borderline
XP_010510403.1 Alkaloid 7DLGT low borderline
XP_010510561.1 Alkaloid 7DLGT low borderline
XP_010510572.1 Alkaloid 7DLGT low borderline
XP_010510612.1 Alkaloid 7DLGT low borderline
XP_010510614.1 Alkaloid 7DLGT low borderline
XP_010510623.1 Alkaloid 7DLGT low borderline
XP_010510647.1 Alkaloid 7DLGT medium pass
XP_010510698.1 Alkaloid 7DLGT low borderline
XP_010511127.1 Alkaloid 7DLGT low borderline
XP_010513240.1 Alkaloid 7DLGT low borderline
XP_010514987.1 Alkaloid 7DLGT high pass
XP_010514991.1 Alkaloid 7DLGT medium pass
XP_010514993.1 Alkaloid 7DLGT high pass
XP_010514994.1 Alkaloid 7DLGT medium pass
XP_010514995.1 Alkaloid 7DLGT high pass
XP_010514997.2 Alkaloid 7DLGT high pass
XP_010515803.2 Alkaloid 7DLGT low borderline
XP_010515806.1 Alkaloid 7DLGT medium pass
XP_010516008.1 Alkaloid 7DLGT low borderline
XP_010516020.2 Alkaloid 7DLGT low borderline
XP_010516155.1 Alkaloid 7DLGT medium pass
XP_010516156.1 Alkaloid 7DLGT high pass
XP_010516158.1 Alkaloid 7DLGT high pass
XP_010516903.2 Alkaloid 7DLGT low borderline