PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status Best Target
XP_019099203.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099204.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099293.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099294.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099295.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099296.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099297.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099298.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099299.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099300.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099301.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099302.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099303.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099304.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099305.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099306.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099307.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099308.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099309.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099310.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099311.1 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
XP_019099745.1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
XP_019099746.1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
XP_019100441.1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
XP_019100443.1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
XP_019100444.1 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH