PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Family-Level Assignments
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
XP_010414263.1 Flavonoid C4H medium borderline
XP_010421446.1 Flavonoid C4H medium borderline
XP_010421447.1 Flavonoid C4H medium borderline
XP_010430754.1 Flavonoid C4H medium borderline
XP_010449951.1 Flavonoid C4H low borderline
XP_010454929.1 Flavonoid C4H medium borderline
XP_010454930.1 Flavonoid C4H medium borderline
XP_010454931.1 Flavonoid C4H medium borderline
XP_010459635.1 Flavonoid C4H medium borderline
XP_010466591.1 Flavonoid C4H low borderline
XP_010469851.1 Flavonoid C4H medium borderline
XP_010477182.1 Flavonoid C4H medium borderline
XP_010485689.1 Flavonoid C4H medium borderline
XP_010493844.1 Flavonoid C4H medium borderline
XP_010501526.1 Flavonoid C4H medium borderline
XP_010507423.1 Flavonoid C4H low borderline
XP_010510361.1 Flavonoid C4H medium borderline
XP_010511939.1 Flavonoid C4H low borderline
XP_019082571.1 Flavonoid C4H low borderline
XP_019087428.1 Flavonoid C4H low borderline
XP_019087579.1 Flavonoid C4H low borderline
XP_019089394.1 Flavonoid C4H low borderline
XP_019089408.1 Flavonoid C4H low borderline
XP_019098527.1 Flavonoid C4H medium borderline
XP_019101164.1 Flavonoid C4H low borderline
XP_019101165.1 Flavonoid C4H low borderline
NP_001289920.1 Rosmarinic Acid C4H low borderline
XP_010412628.1 Rosmarinic Acid C4H medium pass
XP_010412751.2 Rosmarinic Acid C4H medium pass
XP_010412870.1 Rosmarinic Acid C4H low borderline
XP_010413066.1 Rosmarinic Acid C4H low borderline
XP_010413068.1 Rosmarinic Acid C4H low borderline
XP_010413334.1 Rosmarinic Acid C4H low borderline
XP_010413500.1 Rosmarinic Acid C4H low borderline
XP_010413993.1 Rosmarinic Acid C4H low borderline
XP_010413994.1 Rosmarinic Acid C4H low borderline
XP_010414219.1 Rosmarinic Acid C4H low borderline
XP_010414220.1 Rosmarinic Acid C4H medium pass
XP_010414263.1 Rosmarinic Acid C4H medium pass
XP_010414441.1 Rosmarinic Acid C4H low borderline
XP_010414809.1 Rosmarinic Acid C4H low borderline
XP_010415197.1 Rosmarinic Acid C4H medium pass
XP_010415198.1 Rosmarinic Acid C4H medium pass
XP_010415200.1 Rosmarinic Acid C4H medium pass
XP_010415203.1 Rosmarinic Acid C4H low borderline
XP_010415594.1 Rosmarinic Acid C4H low borderline
XP_010416244.1 Rosmarinic Acid C4H low borderline
XP_010416312.1 Rosmarinic Acid C4H medium pass
XP_010416315.1 Rosmarinic Acid C4H medium pass
XP_010416375.1 Rosmarinic Acid C4H low borderline