PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
XP_010416994.1 Rosmarinic Acid C4H low borderline
XP_010417399.1 Rosmarinic Acid C4H low borderline
XP_010417817.1 Rosmarinic Acid C4H low borderline
XP_010417842.1 Rosmarinic Acid C4H medium pass
XP_010417843.1 Rosmarinic Acid C4H low borderline
XP_010418406.1 Rosmarinic Acid C4H low borderline
XP_010418751.2 Rosmarinic Acid C4H low borderline
XP_010418988.1 Rosmarinic Acid C4H low borderline
XP_010419020.1 Rosmarinic Acid C4H low borderline
XP_010419186.2 Rosmarinic Acid C4H medium pass
XP_010419280.1 Rosmarinic Acid C4H medium pass
XP_010421338.1 Rosmarinic Acid C4H low borderline
XP_010421340.1 Rosmarinic Acid C4H low borderline
XP_010421347.1 Rosmarinic Acid C4H low borderline
XP_010421362.1 Rosmarinic Acid C4H low borderline
XP_010421364.1 Rosmarinic Acid C4H low borderline
XP_010421365.1 Rosmarinic Acid C4H low borderline
XP_010421446.1 Rosmarinic Acid C4H low borderline
XP_010421447.1 Rosmarinic Acid C4H low borderline
XP_010421801.1 Rosmarinic Acid C4H low borderline
XP_010421803.1 Rosmarinic Acid C4H low borderline
XP_010422199.1 Rosmarinic Acid C4H medium pass
XP_010422200.1 Rosmarinic Acid C4H medium pass
XP_010422201.1 Rosmarinic Acid C4H medium pass
XP_010422712.1 Rosmarinic Acid C4H low borderline
XP_010422915.1 Rosmarinic Acid C4H medium pass
XP_010423152.1 Rosmarinic Acid C4H low borderline
XP_010423443.1 Rosmarinic Acid C4H low borderline
XP_010423551.1 Rosmarinic Acid C4H low borderline
XP_010423555.1 Rosmarinic Acid C4H low borderline
XP_010423591.1 Rosmarinic Acid C4H low borderline
XP_010424745.1 Rosmarinic Acid C4H low borderline
XP_010424746.1 Rosmarinic Acid C4H low borderline
XP_010425287.1 Rosmarinic Acid C4H low borderline
XP_010425289.1 Rosmarinic Acid C4H medium pass
XP_010425290.1 Rosmarinic Acid C4H medium pass
XP_010425291.1 Rosmarinic Acid C4H medium pass
XP_010425292.1 Rosmarinic Acid C4H low borderline
XP_010425318.1 Rosmarinic Acid C4H medium pass
XP_010425326.2 Rosmarinic Acid C4H medium pass
XP_010425327.1 Rosmarinic Acid C4H medium pass
XP_010425328.1 Rosmarinic Acid C4H low borderline
XP_010425348.1 Rosmarinic Acid C4H low borderline
XP_010425349.1 Rosmarinic Acid C4H low borderline
XP_010425350.1 Rosmarinic Acid C4H low borderline
XP_010425351.1 Rosmarinic Acid C4H low borderline
XP_010425352.1 Rosmarinic Acid C4H low borderline
XP_010425407.1 Rosmarinic Acid C4H low borderline
XP_010425654.1 Rosmarinic Acid C4H medium pass
XP_010425700.1 Rosmarinic Acid C4H low borderline