PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
XP_010436199.1 Rosmarinic Acid C4H medium pass
XP_010436226.1 Rosmarinic Acid C4H low borderline
XP_010436299.1 Rosmarinic Acid C4H low borderline
XP_010436575.1 Rosmarinic Acid C4H low borderline
XP_010437120.1 Rosmarinic Acid C4H low borderline
XP_010437232.1 Rosmarinic Acid C4H low borderline
XP_010437233.1 Rosmarinic Acid C4H low borderline
XP_010437237.1 Rosmarinic Acid C4H medium pass
XP_010437239.1 Rosmarinic Acid C4H low borderline
XP_010437356.1 Rosmarinic Acid C4H low borderline
XP_010437364.1 Rosmarinic Acid C4H low borderline
XP_010437977.1 Rosmarinic Acid C4H low borderline
XP_010438031.2 Rosmarinic Acid C4H medium pass
XP_010439305.2 Rosmarinic Acid C4H medium pass
XP_010439394.1 Rosmarinic Acid C4H low borderline
XP_010439733.1 Rosmarinic Acid C4H low borderline
XP_010440318.1 Rosmarinic Acid C4H low borderline
XP_010440341.1 Rosmarinic Acid C4H low borderline
XP_010440785.1 Rosmarinic Acid C4H low borderline
XP_010440788.1 Rosmarinic Acid C4H medium pass
XP_010441747.1 Rosmarinic Acid C4H low borderline
XP_010441748.1 Rosmarinic Acid C4H low borderline
XP_010441851.2 Rosmarinic Acid C4H low borderline
XP_010441928.1 Rosmarinic Acid C4H low borderline
XP_010442231.1 Rosmarinic Acid C4H low borderline
XP_010442757.1 Rosmarinic Acid C4H low borderline
XP_010443949.1 Rosmarinic Acid C4H low borderline
XP_010444065.1 Rosmarinic Acid C4H low borderline
XP_010444667.1 Rosmarinic Acid C4H medium pass
XP_010444668.1 Rosmarinic Acid C4H medium pass
XP_010444711.1 Rosmarinic Acid C4H low borderline
XP_010444931.1 Rosmarinic Acid C4H low borderline
XP_010445016.1 Rosmarinic Acid C4H low borderline
XP_010445034.2 Rosmarinic Acid C4H low borderline
XP_010446498.1 Rosmarinic Acid C4H low borderline
XP_010446562.1 Rosmarinic Acid C4H low borderline
XP_010446588.1 Rosmarinic Acid C4H low borderline
XP_010446589.1 Rosmarinic Acid C4H low borderline
XP_010446664.1 Rosmarinic Acid C4H low borderline
XP_010446665.1 Rosmarinic Acid C4H low borderline
XP_010446670.1 Rosmarinic Acid C4H medium pass
XP_010446673.1 Rosmarinic Acid C4H medium pass
XP_010446677.1 Rosmarinic Acid C4H low borderline
XP_010446678.2 Rosmarinic Acid C4H medium pass
XP_010446800.1 Rosmarinic Acid C4H low borderline
XP_010446813.1 Rosmarinic Acid C4H low borderline
XP_010447469.1 Rosmarinic Acid C4H medium pass
XP_010447503.1 Rosmarinic Acid C4H medium pass
XP_010448860.1 Rosmarinic Acid C4H medium pass
XP_010449942.1 Rosmarinic Acid C4H low borderline