PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
XP_010481600.1 Steroid CYP90D1 medium borderline
XP_010487143.1 Steroid CYP90D1 medium borderline
XP_010491100.1 Steroid CYP90D1 medium borderline
XP_010491275.1 Steroid CYP90D1 low borderline
XP_010494633.1 Steroid CYP90D1 medium borderline
XP_010495861.1 Steroid CYP90D1 medium borderline
XP_010495892.1 Steroid CYP90D1 medium borderline
XP_010497717.1 Steroid CYP90D1 low borderline
XP_010499912.1 Steroid CYP90D1 low borderline
XP_010501526.1 Steroid CYP90D1 medium borderline
XP_010502914.1 Steroid CYP90D1 medium borderline
XP_010502926.1 Steroid CYP90D1 medium borderline
XP_010508142.1 Steroid CYP90D1 low borderline
XP_010514267.1 Steroid CYP90D1 low borderline
XP_010514624.1 Steroid CYP90D1 medium borderline
XP_010514625.1 Steroid CYP90D1 medium borderline
XP_010515819.1 Steroid CYP90D1 low borderline
XP_019085400.1 Steroid CYP90D1 low borderline
XP_019085959.1 Steroid CYP90D1 medium borderline
XP_019086077.1 Steroid CYP90D1 low borderline
XP_019086912.1 Steroid CYP90D1 low borderline
XP_019086913.1 Steroid CYP90D1 low borderline
XP_019091088.1 Steroid CYP90D1 low borderline
XP_019095904.1 Steroid CYP90D1 low borderline
XP_019096711.1 Steroid CYP90D1 medium borderline
XP_019101500.1 Steroid CYP90D1 low borderline
XP_019101881.1 Steroid CYP90D1 low borderline
XP_019102283.1 Steroid CYP90D1 low borderline