PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
XP_010476294.1 Steroid DWF4/CYP90B1 low borderline
XP_010476295.1 Steroid DWF4/CYP90B1 low borderline
XP_010476296.1 Steroid DWF4/CYP90B1 low borderline
XP_010476297.1 Steroid DWF4/CYP90B1 low borderline
XP_010476298.1 Steroid DWF4/CYP90B1 low borderline
XP_010476300.1 Steroid DWF4/CYP90B1 low borderline
XP_010478597.1 Steroid DWF4/CYP90B1 low borderline
XP_010478793.2 Steroid DWF4/CYP90B1 low borderline
XP_010480460.1 Steroid DWF4/CYP90B1 low borderline
XP_010482059.1 Steroid DWF4/CYP90B1 low borderline
XP_010482535.1 Steroid DWF4/CYP90B1 low borderline
XP_010482589.1 Steroid DWF4/CYP90B1 low borderline
XP_010483230.1 Steroid DWF4/CYP90B1 low borderline
XP_010485078.1 Steroid DWF4/CYP90B1 low borderline
XP_010486669.1 Steroid DWF4/CYP90B1 medium borderline
XP_010487267.1 Steroid DWF4/CYP90B1 low borderline
XP_010487740.1 Steroid DWF4/CYP90B1 low borderline
XP_010487984.1 Steroid DWF4/CYP90B1 low borderline
XP_010487985.1 Steroid DWF4/CYP90B1 low borderline
XP_010490980.1 Steroid DWF4/CYP90B1 medium borderline
XP_010491421.1 Steroid DWF4/CYP90B1 low borderline
XP_010491736.1 Steroid DWF4/CYP90B1 low borderline
XP_010492242.1 Steroid DWF4/CYP90B1 medium borderline
XP_010493219.1 Steroid DWF4/CYP90B1 low borderline
XP_010493220.1 Steroid DWF4/CYP90B1 low borderline
XP_010493430.1 Steroid DWF4/CYP90B1 low borderline
XP_010493760.2 Steroid DWF4/CYP90B1 low borderline
XP_010493844.1 Steroid DWF4/CYP90B1 low borderline
XP_010494547.1 Steroid DWF4/CYP90B1 medium borderline
XP_010494931.1 Steroid DWF4/CYP90B1 low borderline
XP_010494943.1 Steroid DWF4/CYP90B1 low borderline
XP_010494953.1 Steroid DWF4/CYP90B1 low borderline
XP_010494965.1 Steroid DWF4/CYP90B1 low borderline
XP_010495480.2 Steroid DWF4/CYP90B1 low borderline
XP_010495486.1 Steroid DWF4/CYP90B1 low borderline
XP_010499724.1 Steroid DWF4/CYP90B1 low borderline
XP_010499946.1 Steroid DWF4/CYP90B1 low borderline
XP_010500514.1 Steroid DWF4/CYP90B1 low borderline
XP_010501770.1 Steroid DWF4/CYP90B1 low borderline
XP_010501999.1 Steroid DWF4/CYP90B1 low borderline
XP_010502007.2 Steroid DWF4/CYP90B1 low borderline
XP_010502032.2 Steroid DWF4/CYP90B1 low borderline
XP_010502523.1 Steroid DWF4/CYP90B1 low borderline
XP_010502525.1 Steroid DWF4/CYP90B1 low borderline
XP_010502526.1 Steroid DWF4/CYP90B1 low borderline
XP_010502528.1 Steroid DWF4/CYP90B1 low borderline
XP_010502530.1 Steroid DWF4/CYP90B1 low borderline
XP_010502532.1 Steroid DWF4/CYP90B1 low borderline
XP_010502533.1 Steroid DWF4/CYP90B1 low borderline
XP_010502535.1 Steroid DWF4/CYP90B1 low borderline