PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
XP_010512993.2 Flavonoid FNS low borderline
XP_010513328.1 Flavonoid FNS medium borderline
XP_010517830.1 Flavonoid FNS medium borderline
XP_010518631.1 Flavonoid FNS medium borderline
XP_019082429.1 Flavonoid FNS medium borderline
XP_019082434.1 Flavonoid FNS medium borderline
XP_019083316.1 Flavonoid FNS low borderline
XP_019084979.1 Flavonoid FNS low borderline
XP_019086568.1 Flavonoid FNS low borderline
XP_019086912.1 Flavonoid FNS low borderline
XP_019086913.1 Flavonoid FNS low borderline
XP_019087275.1 Flavonoid FNS medium borderline
XP_019091938.1 Flavonoid FNS medium borderline
XP_019093668.1 Flavonoid FNS low borderline
XP_019093702.1 Flavonoid FNS medium borderline
XP_019093703.1 Flavonoid FNS medium borderline
XP_019095465.1 Flavonoid FNS low borderline
XP_019095466.1 Flavonoid FNS low borderline
XP_019096940.1 Flavonoid FNS medium borderline
XP_019099817.1 Flavonoid FNS low borderline
XP_019099820.1 Flavonoid FNS low borderline
XP_019100080.1 Flavonoid FNS medium borderline
XP_019101146.1 Flavonoid FNS medium borderline