PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
XP_010413068.1 Alkaloid G8O/G8H medium borderline
XP_010415197.1 Alkaloid G8O/G8H medium borderline
XP_010415198.1 Alkaloid G8O/G8H medium borderline
XP_010415203.1 Alkaloid G8O/G8H medium borderline
XP_010421803.1 Alkaloid G8O/G8H medium borderline
XP_010425654.1 Alkaloid G8O/G8H medium borderline
XP_010426968.2 Alkaloid G8O/G8H medium borderline
XP_010429264.1 Alkaloid G8O/G8H medium borderline
XP_010429265.1 Alkaloid G8O/G8H medium borderline
XP_010429385.1 Alkaloid G8O/G8H medium borderline
XP_010430757.2 Alkaloid G8O/G8H medium pass
XP_010432067.1 Alkaloid G8O/G8H medium borderline
XP_010435500.1 Alkaloid G8O/G8H medium borderline
XP_010438031.2 Alkaloid G8O/G8H medium borderline
XP_010439394.1 Alkaloid G8O/G8H medium borderline
XP_010441851.2 Alkaloid G8O/G8H medium borderline
XP_010441928.1 Alkaloid G8O/G8H medium borderline
XP_010445034.2 Alkaloid G8O/G8H medium borderline
XP_010447503.1 Alkaloid G8O/G8H medium borderline
XP_010451019.1 Alkaloid G8O/G8H medium borderline
XP_010461230.1 Alkaloid G8O/G8H medium borderline
XP_010461231.1 Alkaloid G8O/G8H medium borderline
XP_010461232.1 Alkaloid G8O/G8H medium borderline
XP_010468312.1 Alkaloid G8O/G8H medium borderline
XP_010468415.1 Alkaloid G8O/G8H low borderline
XP_010470528.1 Alkaloid G8O/G8H medium borderline
XP_010470529.1 Alkaloid G8O/G8H medium borderline
XP_010471542.1 Alkaloid G8O/G8H medium borderline
XP_010472318.1 Alkaloid G8O/G8H medium borderline
XP_010472422.1 Alkaloid G8O/G8H medium borderline
XP_010476294.1 Alkaloid G8O/G8H medium borderline
XP_010481794.1 Alkaloid G8O/G8H medium borderline
XP_010487979.1 Alkaloid G8O/G8H medium borderline
XP_010490979.1 Alkaloid G8O/G8H medium borderline
XP_010491736.1 Alkaloid G8O/G8H medium borderline
XP_010494388.1 Alkaloid G8O/G8H medium borderline
XP_010501278.1 Alkaloid G8O/G8H low borderline
XP_010501770.1 Alkaloid G8O/G8H medium borderline
XP_010502942.1 Alkaloid G8O/G8H medium borderline
XP_010506037.1 Alkaloid G8O/G8H low borderline
XP_010506682.2 Alkaloid G8O/G8H medium borderline
XP_010507986.1 Alkaloid G8O/G8H medium borderline
XP_010511484.1 Alkaloid G8O/G8H medium borderline
XP_010513328.1 Alkaloid G8O/G8H medium borderline
XP_010513418.1 Alkaloid G8O/G8H medium borderline
XP_010513554.1 Alkaloid G8O/G8H medium borderline
XP_010514586.1 Alkaloid G8O/G8H medium borderline
XP_010514587.1 Alkaloid G8O/G8H medium borderline
XP_010515819.1 Alkaloid G8O/G8H medium borderline
XP_010518175.2 Alkaloid G8O/G8H medium borderline