PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
XP_010493525.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
XP_010494502.1 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
XP_010494503.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
XP_010494504.1 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
XP_010501939.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
XP_010502464.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_010502465.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_010502466.1 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
XP_010502467.1 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
XP_010514205.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_010514206.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_010514210.1 Alkaloid GES medium pass GES__00005__sp_Q308N0_GRNL6_PERFR
XP_019082746.1 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
XP_019083544.1 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
XP_019083545.1 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
XP_019083713.1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
XP_019083719.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_019083720.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_019085664.1 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
XP_019085930.1 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
XP_019086441.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_019086516.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_019086517.1 Alkaloid GES medium pass GES__00005__sp_Q308N0_GRNL6_PERFR
XP_019087142.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_019087143.1 Alkaloid GES medium pass GES__00005__sp_Q308N0_GRNL6_PERFR
XP_019087414.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_019088220.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
XP_019092625.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
XP_019101808.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU