PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
XP_010458894.1 Alkaloid H6H low borderline
XP_010458895.1 Alkaloid H6H low borderline
XP_010459096.1 Alkaloid H6H low borderline
XP_010460572.1 Alkaloid H6H low borderline
XP_010460573.1 Alkaloid H6H low borderline
XP_010460700.1 Alkaloid H6H medium borderline
XP_010460711.1 Alkaloid H6H medium borderline
XP_010460721.1 Alkaloid H6H medium borderline
XP_010460731.1 Alkaloid H6H medium pass
XP_010460741.1 Alkaloid H6H medium borderline
XP_010460752.1 Alkaloid H6H medium borderline
XP_010460762.1 Alkaloid H6H medium borderline
XP_010460782.1 Alkaloid H6H medium pass
XP_010460792.1 Alkaloid H6H medium pass
XP_010462133.1 Alkaloid H6H low borderline
XP_010462134.1 Alkaloid H6H low borderline
XP_010462531.1 Alkaloid H6H low borderline
XP_010463263.1 Alkaloid H6H medium borderline
XP_010463426.1 Alkaloid H6H low borderline
XP_010464810.1 Alkaloid H6H low borderline
XP_010464819.1 Alkaloid H6H medium borderline
XP_010466382.1 Alkaloid H6H medium borderline
XP_010468146.1 Alkaloid H6H low borderline
XP_010468226.1 Alkaloid H6H low borderline
XP_010468864.1 Alkaloid H6H low borderline
XP_010471925.1 Alkaloid H6H medium borderline
XP_010472949.1 Alkaloid H6H low borderline
XP_010472950.1 Alkaloid H6H low borderline
XP_010473231.1 Alkaloid H6H low borderline
XP_010473457.1 Alkaloid H6H medium borderline
XP_010475176.1 Alkaloid H6H medium borderline
XP_010475402.1 Alkaloid H6H medium borderline
XP_010475404.1 Alkaloid H6H medium borderline
XP_010476442.1 Alkaloid H6H low borderline
XP_010476443.1 Alkaloid H6H low borderline
XP_010476644.1 Alkaloid H6H low borderline
XP_010478155.1 Alkaloid H6H low borderline
XP_010479801.1 Alkaloid H6H low borderline
XP_010479807.1 Alkaloid H6H low borderline
XP_010479808.1 Alkaloid H6H low borderline
XP_010479810.1 Alkaloid H6H low borderline
XP_010480968.1 Alkaloid H6H medium pass
XP_010483593.1 Alkaloid H6H medium borderline
XP_010484101.1 Alkaloid H6H medium borderline
XP_010484102.1 Alkaloid H6H medium pass
XP_010484104.1 Alkaloid H6H medium borderline
XP_010484105.1 Alkaloid H6H medium pass
XP_010484106.2 Alkaloid H6H medium borderline
XP_010484107.1 Alkaloid H6H medium pass
XP_010484109.1 Alkaloid H6H medium pass