PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
XP_010485051.1 Alkaloid H6H low borderline
XP_010486383.1 Alkaloid H6H medium borderline
XP_010486757.1 Alkaloid H6H low borderline
XP_010487452.1 Alkaloid H6H medium borderline
XP_010488155.1 Alkaloid H6H medium borderline
XP_010488163.1 Alkaloid H6H low borderline
XP_010491513.1 Alkaloid H6H medium borderline
XP_010493615.1 Alkaloid H6H medium borderline
XP_010495763.1 Alkaloid H6H low borderline
XP_010495766.1 Alkaloid H6H low borderline
XP_010495771.1 Alkaloid H6H low borderline
XP_010495777.1 Alkaloid H6H low borderline
XP_010497232.1 Alkaloid H6H low borderline
XP_010497307.2 Alkaloid H6H low borderline
XP_010499297.1 Alkaloid H6H low borderline
XP_010500784.1 Alkaloid H6H medium borderline
XP_010500899.1 Alkaloid H6H low borderline
XP_010500901.1 Alkaloid H6H low borderline
XP_010500902.1 Alkaloid H6H low borderline
XP_010500906.1 Alkaloid H6H low borderline
XP_010500907.1 Alkaloid H6H low borderline
XP_010500908.1 Alkaloid H6H low borderline
XP_010503810.1 Alkaloid H6H high pass
XP_010504468.1 Alkaloid H6H medium borderline
XP_010505441.1 Alkaloid H6H medium borderline
XP_010507686.1 Alkaloid H6H medium borderline
XP_010509205.1 Alkaloid H6H medium borderline
XP_010510193.1 Alkaloid H6H medium borderline
XP_010512741.1 Alkaloid H6H low borderline
XP_010512742.1 Alkaloid H6H low borderline
XP_010515383.1 Alkaloid H6H low borderline
XP_010515520.1 Alkaloid H6H high pass
XP_010517112.1 Alkaloid H6H medium borderline
XP_019082471.1 Alkaloid H6H high pass
XP_019085152.1 Alkaloid H6H medium borderline
XP_019087014.1 Alkaloid H6H low borderline
XP_019088376.1 Alkaloid H6H medium borderline
XP_019088377.1 Alkaloid H6H medium borderline
XP_019088379.1 Alkaloid H6H medium borderline
XP_019089078.1 Alkaloid H6H low borderline
XP_019090609.1 Alkaloid H6H low borderline
XP_019091549.1 Alkaloid H6H medium borderline
XP_019091946.1 Alkaloid H6H low borderline
XP_019091972.1 Alkaloid H6H low borderline
XP_019091973.1 Alkaloid H6H low borderline
XP_019092214.1 Alkaloid H6H low borderline
XP_019093236.1 Alkaloid H6H medium borderline
XP_019093397.1 Alkaloid H6H medium pass
XP_019093876.1 Alkaloid H6H medium borderline
XP_019093910.1 Alkaloid H6H medium borderline