PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
XP_010446960.1 Flavonoid IFR medium pass
XP_010447064.1 Flavonoid IFR high pass
XP_010447507.1 Flavonoid IFR low borderline
XP_010448638.1 Flavonoid IFR low borderline
XP_010449464.1 Flavonoid IFR low borderline
XP_010449465.1 Flavonoid IFR low borderline
XP_010450179.1 Flavonoid IFR high pass
XP_010450813.1 Flavonoid IFR low borderline
XP_010451045.1 Flavonoid IFR low borderline
XP_010452056.1 Flavonoid IFR low borderline
XP_010453105.1 Flavonoid IFR low borderline
XP_010453599.1 Flavonoid IFR low borderline
XP_010453741.1 Flavonoid IFR low borderline
XP_010453742.1 Flavonoid IFR low borderline
XP_010454119.1 Flavonoid IFR medium pass
XP_010455398.1 Flavonoid IFR low borderline
XP_010456264.1 Flavonoid IFR low borderline
XP_010458216.1 Flavonoid IFR low borderline
XP_010459216.1 Flavonoid IFR low borderline
XP_010459628.1 Flavonoid IFR high pass
XP_010459630.1 Flavonoid IFR high pass
XP_010461029.1 Flavonoid IFR high pass
XP_010461040.1 Flavonoid IFR low borderline
XP_010466021.1 Flavonoid IFR low borderline
XP_010467837.1 Flavonoid IFR low borderline
XP_010468914.1 Flavonoid IFR low borderline
XP_010468915.1 Flavonoid IFR low borderline
XP_010468916.1 Flavonoid IFR low borderline
XP_010471636.1 Flavonoid IFR high pass
XP_010471638.1 Flavonoid IFR high pass
XP_010471639.1 Flavonoid IFR high pass
XP_010475766.1 Flavonoid IFR low borderline
XP_010476256.1 Flavonoid IFR low borderline
XP_010476791.1 Flavonoid IFR low borderline
XP_010477176.1 Flavonoid IFR high pass
XP_010477177.1 Flavonoid IFR high pass
XP_010478629.1 Flavonoid IFR high pass
XP_010478630.1 Flavonoid IFR high pass
XP_010478644.1 Flavonoid IFR low borderline
XP_010487816.1 Flavonoid IFR low borderline
XP_010489051.1 Flavonoid IFR low borderline
XP_010489928.1 Flavonoid IFR low borderline
XP_010490641.1 Flavonoid IFR low borderline
XP_010491750.1 Flavonoid IFR low borderline
XP_010492445.1 Flavonoid IFR low borderline
XP_010492447.1 Flavonoid IFR low borderline
XP_010492887.1 Flavonoid IFR medium pass
XP_010497419.1 Flavonoid IFR low borderline
XP_010497997.2 Flavonoid IFR low borderline
XP_010498000.1 Flavonoid IFR low borderline