PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
NP_001289920.1 Flavonoid IFS low borderline
XP_010412869.1 Flavonoid IFS low borderline
XP_010412870.1 Flavonoid IFS low borderline
XP_010413066.1 Flavonoid IFS low borderline
XP_010413068.1 Flavonoid IFS medium borderline
XP_010413500.1 Flavonoid IFS medium borderline
XP_010414273.1 Flavonoid IFS low borderline
XP_010414441.1 Flavonoid IFS low borderline
XP_010414471.1 Flavonoid IFS low borderline
XP_010415197.1 Flavonoid IFS medium borderline
XP_010415198.1 Flavonoid IFS medium borderline
XP_010415203.1 Flavonoid IFS medium borderline
XP_010415594.1 Flavonoid IFS low borderline
XP_010416312.1 Flavonoid IFS medium borderline
XP_010416315.1 Flavonoid IFS medium borderline
XP_010416375.1 Flavonoid IFS low borderline
XP_010417074.1 Flavonoid IFS low borderline
XP_010417232.2 Flavonoid IFS low borderline
XP_010417842.1 Flavonoid IFS medium borderline
XP_010417843.1 Flavonoid IFS medium borderline
XP_010418406.1 Flavonoid IFS low borderline
XP_010418988.1 Flavonoid IFS low borderline
XP_010419280.1 Flavonoid IFS medium borderline
XP_010419577.1 Flavonoid IFS low borderline
XP_010419579.1 Flavonoid IFS low borderline
XP_010420076.2 Flavonoid IFS low borderline
XP_010421118.1 Flavonoid IFS low borderline
XP_010421362.1 Flavonoid IFS medium borderline
XP_010421364.1 Flavonoid IFS medium borderline
XP_010421365.1 Flavonoid IFS medium borderline
XP_010422199.1 Flavonoid IFS medium borderline
XP_010422200.1 Flavonoid IFS medium borderline
XP_010422201.1 Flavonoid IFS medium borderline
XP_010422712.1 Flavonoid IFS medium borderline
XP_010423121.1 Flavonoid IFS low borderline
XP_010423152.1 Flavonoid IFS medium borderline
XP_010423443.1 Flavonoid IFS low borderline
XP_010424745.1 Flavonoid IFS medium borderline
XP_010424746.1 Flavonoid IFS medium borderline
XP_010425287.1 Flavonoid IFS low borderline
XP_010425289.1 Flavonoid IFS medium borderline
XP_010425290.1 Flavonoid IFS medium borderline
XP_010425291.1 Flavonoid IFS medium borderline
XP_010425292.1 Flavonoid IFS medium borderline
XP_010425318.1 Flavonoid IFS medium borderline
XP_010425326.2 Flavonoid IFS medium borderline
XP_010425348.1 Flavonoid IFS medium borderline
XP_010425350.1 Flavonoid IFS medium borderline
XP_010425351.1 Flavonoid IFS medium borderline
XP_010425654.1 Flavonoid IFS medium borderline