PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
XP_010454600.1 Flavonoid IFS low borderline
XP_010454836.1 Flavonoid IFS medium borderline
XP_010454837.1 Flavonoid IFS medium borderline
XP_010455668.1 Flavonoid IFS medium borderline
XP_010455670.1 Flavonoid IFS medium borderline
XP_010455672.1 Flavonoid IFS medium borderline
XP_010456149.1 Flavonoid IFS medium borderline
XP_010456392.1 Flavonoid IFS medium borderline
XP_010457143.1 Flavonoid IFS medium borderline
XP_010457592.1 Flavonoid IFS low borderline
XP_010458707.1 Flavonoid IFS low borderline
XP_010458750.1 Flavonoid IFS medium borderline
XP_010458751.1 Flavonoid IFS medium borderline
XP_010459267.1 Flavonoid IFS low borderline
XP_010460278.1 Flavonoid IFS low borderline
XP_010460641.1 Flavonoid IFS medium borderline
XP_010461906.1 Flavonoid IFS medium borderline
XP_010464230.1 Flavonoid IFS medium borderline
XP_010465234.1 Flavonoid IFS low borderline
XP_010465353.1 Flavonoid IFS low borderline
XP_010465355.1 Flavonoid IFS low borderline
XP_010465357.1 Flavonoid IFS low borderline
XP_010465361.1 Flavonoid IFS low borderline
XP_010465366.1 Flavonoid IFS low borderline
XP_010465913.1 Flavonoid IFS medium borderline
XP_010466060.1 Flavonoid IFS low borderline
XP_010466183.1 Flavonoid IFS medium borderline
XP_010466190.2 Flavonoid IFS medium borderline
XP_010466191.1 Flavonoid IFS medium borderline
XP_010466192.1 Flavonoid IFS medium borderline
XP_010466194.1 Flavonoid IFS medium borderline
XP_010466304.1 Flavonoid IFS medium borderline
XP_010466305.1 Flavonoid IFS medium borderline
XP_010466306.1 Flavonoid IFS medium borderline
XP_010466307.1 Flavonoid IFS medium borderline
XP_010466308.1 Flavonoid IFS medium borderline
XP_010466938.1 Flavonoid IFS medium borderline
XP_010467059.1 Flavonoid IFS medium borderline
XP_010468312.1 Flavonoid IFS medium borderline
XP_010468313.1 Flavonoid IFS medium borderline
XP_010468415.1 Flavonoid IFS low borderline
XP_010469993.1 Flavonoid IFS low borderline
XP_010470037.1 Flavonoid IFS low borderline
XP_010470040.1 Flavonoid IFS low borderline
XP_010470528.1 Flavonoid IFS medium borderline
XP_010470529.1 Flavonoid IFS medium borderline
XP_010470608.1 Flavonoid IFS low borderline
XP_010470937.1 Flavonoid IFS low borderline
XP_010471543.1 Flavonoid IFS medium borderline
XP_010471616.1 Flavonoid IFS low borderline