PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
XP_010508154.1 Flavonoid IFS medium borderline
XP_010508155.1 Flavonoid IFS medium borderline
XP_010508159.1 Flavonoid IFS low borderline
XP_010508196.1 Flavonoid IFS low borderline
XP_010508469.1 Flavonoid IFS medium borderline
XP_010508486.1 Flavonoid IFS medium borderline
XP_010508494.1 Flavonoid IFS medium borderline
XP_010508508.1 Flavonoid IFS medium borderline
XP_010508519.1 Flavonoid IFS medium borderline
XP_010508531.1 Flavonoid IFS medium borderline
XP_010508601.1 Flavonoid IFS medium borderline
XP_010508793.1 Flavonoid IFS medium borderline
XP_010508794.1 Flavonoid IFS medium borderline
XP_010509743.1 Flavonoid IFS low borderline
XP_010509744.1 Flavonoid IFS low borderline
XP_010510536.1 Flavonoid IFS low borderline
XP_010510570.1 Flavonoid IFS low borderline
XP_010510742.1 Flavonoid IFS low borderline
XP_010511458.1 Flavonoid IFS medium borderline
XP_010511484.1 Flavonoid IFS medium borderline
XP_010511627.1 Flavonoid IFS low borderline
XP_010511987.1 Flavonoid IFS low borderline
XP_010513269.1 Flavonoid IFS low borderline
XP_010513270.1 Flavonoid IFS low borderline
XP_010513271.1 Flavonoid IFS low borderline
XP_010513320.2 Flavonoid IFS medium borderline
XP_010513418.1 Flavonoid IFS medium borderline
XP_010513554.1 Flavonoid IFS medium borderline
XP_010513571.1 Flavonoid IFS low borderline
XP_010513989.1 Flavonoid IFS medium borderline
XP_010514257.1 Flavonoid IFS low borderline
XP_010514261.1 Flavonoid IFS medium borderline
XP_010514262.1 Flavonoid IFS medium borderline
XP_010514263.1 Flavonoid IFS medium borderline
XP_010514264.1 Flavonoid IFS medium borderline
XP_010514265.1 Flavonoid IFS medium borderline
XP_010514267.1 Flavonoid IFS medium borderline
XP_010514271.1 Flavonoid IFS medium borderline
XP_010514290.1 Flavonoid IFS medium borderline
XP_010514291.1 Flavonoid IFS medium borderline
XP_010514292.1 Flavonoid IFS medium borderline
XP_010514293.1 Flavonoid IFS medium borderline
XP_010514586.1 Flavonoid IFS medium borderline
XP_010514587.1 Flavonoid IFS medium borderline
XP_010514624.1 Flavonoid IFS low borderline
XP_010514625.1 Flavonoid IFS low borderline
XP_010514626.1 Flavonoid IFS medium borderline
XP_010514627.1 Flavonoid IFS low borderline
XP_010514672.1 Flavonoid IFS low borderline
XP_010515436.1 Flavonoid IFS low borderline