PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
XP_010475069.1 Alkaloid PYKS low borderline
XP_010475071.1 Alkaloid PYKS low borderline
XP_010475542.1 Alkaloid PYKS low borderline
XP_010477163.1 Alkaloid PYKS low borderline
XP_010477925.1 Alkaloid PYKS low borderline
XP_010480647.1 Alkaloid PYKS low borderline
XP_010481829.1 Alkaloid PYKS low borderline
XP_010482191.2 Alkaloid PYKS low borderline
XP_010483273.1 Alkaloid PYKS low borderline
XP_010483281.1 Alkaloid PYKS low borderline
XP_010488941.1 Alkaloid PYKS low borderline
XP_010489197.1 Alkaloid PYKS low borderline
XP_010489202.1 Alkaloid PYKS low borderline
XP_010490966.1 Alkaloid PYKS low borderline
XP_010492176.1 Alkaloid PYKS high pass
XP_010493917.1 Alkaloid PYKS low borderline
XP_010494354.1 Alkaloid PYKS low borderline
XP_010497170.2 Alkaloid PYKS low borderline
XP_010497459.2 Alkaloid PYKS high pass
XP_010497596.1 Alkaloid PYKS low borderline
XP_010498362.1 Alkaloid PYKS low borderline
XP_010499108.1 Alkaloid PYKS low borderline
XP_010501268.1 Alkaloid PYKS medium pass
XP_010503940.1 Alkaloid PYKS low borderline
XP_010506689.1 Alkaloid PYKS low borderline
XP_010507981.1 Alkaloid PYKS low borderline
XP_010510599.1 Alkaloid PYKS low borderline
XP_010511851.1 Alkaloid PYKS low borderline
XP_010515664.1 Alkaloid PYKS low borderline
XP_010516847.1 Alkaloid PYKS low borderline
XP_010516877.1 Alkaloid PYKS low borderline
XP_010518010.1 Alkaloid PYKS low borderline
XP_019082430.1 Alkaloid PYKS low borderline
XP_019086891.1 Alkaloid PYKS high pass
XP_019088180.1 Alkaloid PYKS high pass
XP_019088343.1 Alkaloid PYKS low borderline
XP_019088344.1 Alkaloid PYKS low borderline
XP_019088493.1 Alkaloid PYKS high pass
XP_019088494.1 Alkaloid PYKS high pass
XP_019089998.1 Alkaloid PYKS low borderline
XP_019090937.1 Alkaloid PYKS medium pass
XP_019091244.1 Alkaloid PYKS low borderline
XP_019091656.1 Alkaloid PYKS low borderline
XP_019093776.1 Alkaloid PYKS low borderline
XP_019093873.1 Alkaloid PYKS low borderline
XP_019094145.1 Alkaloid PYKS low borderline
XP_019094325.1 Alkaloid PYKS high pass
XP_019094837.1 Alkaloid PYKS low borderline
XP_019094838.1 Alkaloid PYKS low borderline
XP_019100661.1 Alkaloid PYKS low borderline