PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status Best Target
XP_010506717.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_010507950.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_010508159.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_010508196.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_010510801.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_010511352.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_010511627.1 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
XP_010513495.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_010513571.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_010518137.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_010518171.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019082414.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019082434.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019082435.1 Alkaloid SLS medium pass SLS__00001__sp_Q05047_SLS1_CATRO
XP_019083203.1 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
XP_019083204.1 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
XP_019085893.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019086077.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019086625.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019087488.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019087900.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019088824.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019093295.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019093792.1 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
XP_019099814.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019101146.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
XP_019101500.1 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
XP_019101556.1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO