PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status Best Target
XP_010510536.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010510570.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010511136.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010511458.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010511460.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010513269.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010513270.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010513271.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010513989.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010514268.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
XP_010514626.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_010515145.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
XP_010515146.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
XP_010515436.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
XP_010516597.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019082544.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019082571.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019082597.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019084412.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019084413.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019085534.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019086168.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019087094.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
XP_019088984.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019092783.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019093301.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
XP_019093535.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019094304.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019094324.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
XP_019096707.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019096940.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019096971.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019096974.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019098972.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019100222.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
XP_019101880.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO