PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
XP_010428977.1 Alkaloid T3O medium pass
XP_010430758.1 Alkaloid T3O medium borderline
XP_010430765.1 Alkaloid T3O medium borderline
XP_010431121.1 Alkaloid T3O medium borderline
XP_010431125.1 Alkaloid T3O medium borderline
XP_010431317.2 Alkaloid T3O medium borderline
XP_010432063.1 Alkaloid T3O medium borderline
XP_010432066.1 Alkaloid T3O medium borderline
XP_010432068.1 Alkaloid T3O medium borderline
XP_010432189.1 Alkaloid T3O medium borderline
XP_010432796.1 Alkaloid T3O medium borderline
XP_010433602.1 Alkaloid T3O medium borderline
XP_010434250.1 Alkaloid T3O medium borderline
XP_010434261.1 Alkaloid T3O medium borderline
XP_010434268.1 Alkaloid T3O medium borderline
XP_010434290.1 Alkaloid T3O medium borderline
XP_010434431.1 Alkaloid T3O medium pass
XP_010435226.1 Alkaloid T3O medium borderline
XP_010435805.1 Alkaloid T3O medium pass
XP_010436199.1 Alkaloid T3O medium borderline
XP_010436226.1 Alkaloid T3O medium borderline
XP_010436299.1 Alkaloid T3O medium borderline
XP_010436575.1 Alkaloid T3O medium borderline
XP_010436732.1 Alkaloid T3O low borderline
XP_010437232.1 Alkaloid T3O medium borderline
XP_010437233.1 Alkaloid T3O medium borderline
XP_010437237.1 Alkaloid T3O medium borderline
XP_010437239.1 Alkaloid T3O medium borderline
XP_010437356.1 Alkaloid T3O medium pass
XP_010437364.1 Alkaloid T3O medium borderline
XP_010437977.1 Alkaloid T3O medium borderline
XP_010439733.1 Alkaloid T3O medium pass
XP_010440788.1 Alkaloid T3O medium borderline
XP_010441026.1 Alkaloid T3O medium pass
XP_010441747.1 Alkaloid T3O medium pass
XP_010441748.1 Alkaloid T3O medium pass
XP_010444065.1 Alkaloid T3O medium pass
XP_010444242.1 Alkaloid T3O low borderline
XP_010444667.1 Alkaloid T3O medium borderline
XP_010445016.1 Alkaloid T3O medium borderline
XP_010446664.1 Alkaloid T3O medium borderline
XP_010446665.1 Alkaloid T3O medium borderline
XP_010446670.1 Alkaloid T3O medium borderline
XP_010446673.1 Alkaloid T3O medium borderline
XP_010446677.1 Alkaloid T3O medium borderline
XP_010446678.2 Alkaloid T3O medium borderline
XP_010446800.1 Alkaloid T3O medium pass
XP_010446813.1 Alkaloid T3O medium borderline
XP_010447469.1 Alkaloid T3O medium borderline
XP_010449942.1 Alkaloid T3O medium borderline