PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

5817
Candidate Protein Records
4681
Pathway-Level Records
11555
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
XP_010502526.1 Alkaloid T3O medium borderline
XP_010502528.1 Alkaloid T3O medium borderline
XP_010502529.1 Alkaloid T3O medium borderline
XP_010502530.1 Alkaloid T3O medium borderline
XP_010502532.1 Alkaloid T3O medium borderline
XP_010502535.1 Alkaloid T3O medium borderline
XP_010502536.2 Alkaloid T3O medium borderline
XP_010502537.1 Alkaloid T3O medium borderline
XP_010502539.1 Alkaloid T3O medium borderline
XP_010502547.1 Alkaloid T3O medium borderline
XP_010502631.1 Alkaloid T3O medium borderline
XP_010502914.1 Alkaloid T3O medium pass
XP_010502920.1 Alkaloid T3O medium pass
XP_010502926.1 Alkaloid T3O medium pass
XP_010502996.1 Alkaloid T3O medium pass
XP_010503460.1 Alkaloid T3O medium borderline
XP_010503490.1 Alkaloid T3O low borderline
XP_010504087.1 Alkaloid T3O medium borderline
XP_010504571.1 Alkaloid T3O low borderline
XP_010505845.1 Alkaloid T3O medium borderline
XP_010506129.1 Alkaloid T3O medium pass
XP_010506513.1 Alkaloid T3O medium borderline
XP_010506515.1 Alkaloid T3O medium borderline
XP_010506516.1 Alkaloid T3O medium borderline
XP_010506518.1 Alkaloid T3O medium borderline
XP_010506519.1 Alkaloid T3O medium borderline
XP_010506620.1 Alkaloid T3O medium borderline
XP_010507578.1 Alkaloid T3O medium pass
XP_010508139.1 Alkaloid T3O medium borderline
XP_010508141.1 Alkaloid T3O medium borderline
XP_010508143.1 Alkaloid T3O medium borderline
XP_010508144.1 Alkaloid T3O medium borderline
XP_010508148.2 Alkaloid T3O medium borderline
XP_010508150.1 Alkaloid T3O medium borderline
XP_010508153.1 Alkaloid T3O medium borderline
XP_010508154.1 Alkaloid T3O medium borderline
XP_010508155.1 Alkaloid T3O medium borderline
XP_010508516.1 Alkaloid T3O medium pass
XP_010508531.1 Alkaloid T3O medium borderline
XP_010508601.1 Alkaloid T3O medium borderline
XP_010508793.1 Alkaloid T3O medium borderline
XP_010508794.1 Alkaloid T3O medium borderline
XP_010509744.1 Alkaloid T3O low borderline
XP_010510015.1 Alkaloid T3O medium pass
XP_010510016.1 Alkaloid T3O medium pass
XP_010510742.1 Alkaloid T3O low borderline
XP_010511939.1 Alkaloid T3O medium pass
XP_010514261.1 Alkaloid T3O medium borderline
XP_010514262.1 Alkaloid T3O medium borderline
XP_010514263.1 Alkaloid T3O medium borderline