PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TAT
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Gene Pathway Family Confidence Status
XP_010416981.1 Rosmarinic Acid TAT low borderline
XP_010416982.1 Rosmarinic Acid TAT low borderline
XP_010417720.1 Rosmarinic Acid TAT medium pass
XP_010417721.1 Rosmarinic Acid TAT medium pass
XP_010422271.1 Rosmarinic Acid TAT medium pass
XP_010423922.1 Rosmarinic Acid TAT low borderline
XP_010425699.1 Rosmarinic Acid TAT medium pass
XP_010425703.1 Rosmarinic Acid TAT medium pass
XP_010429140.1 Rosmarinic Acid TAT low borderline
XP_010429141.1 Rosmarinic Acid TAT low borderline
XP_010429976.1 Rosmarinic Acid TAT medium pass
XP_010432683.1 Rosmarinic Acid TAT medium pass
XP_010432700.1 Rosmarinic Acid TAT medium pass
XP_010432707.1 Rosmarinic Acid TAT medium pass
XP_010432733.1 Rosmarinic Acid TAT medium pass
XP_010433220.1 Rosmarinic Acid TAT medium pass
XP_010433886.1 Rosmarinic Acid TAT medium pass
XP_010436417.1 Rosmarinic Acid TAT low borderline
XP_010436684.1 Rosmarinic Acid TAT medium pass
XP_010438458.1 Rosmarinic Acid TAT medium pass
XP_010442592.1 Rosmarinic Acid TAT low borderline
XP_010442970.1 Rosmarinic Acid TAT medium pass
XP_010446315.1 Rosmarinic Acid TAT medium pass
XP_010447982.1 Rosmarinic Acid TAT medium pass
XP_010447983.1 Rosmarinic Acid TAT medium pass
XP_010448675.1 Rosmarinic Acid TAT medium pass
XP_010448677.1 Rosmarinic Acid TAT medium pass
XP_010448679.1 Rosmarinic Acid TAT medium pass
XP_010450440.1 Rosmarinic Acid TAT medium pass
XP_010452012.1 Rosmarinic Acid TAT low borderline
XP_010455736.1 Rosmarinic Acid TAT medium pass
XP_010455737.1 Rosmarinic Acid TAT medium pass
XP_010466664.1 Rosmarinic Acid TAT medium pass
XP_010467788.1 Rosmarinic Acid TAT medium pass
XP_010467789.1 Rosmarinic Acid TAT medium pass
XP_010472217.1 Rosmarinic Acid TAT low borderline
XP_010472945.1 Rosmarinic Acid TAT medium pass
XP_010472946.1 Rosmarinic Acid TAT medium pass
XP_010478021.2 Rosmarinic Acid TAT medium pass
XP_010478899.1 Rosmarinic Acid TAT low borderline
XP_010482806.1 Rosmarinic Acid TAT medium pass
XP_010489013.1 Rosmarinic Acid TAT medium pass
XP_010490596.1 Rosmarinic Acid TAT low borderline
XP_010499177.1 Rosmarinic Acid TAT medium pass
XP_010502922.1 Rosmarinic Acid TAT medium pass
XP_010502923.1 Rosmarinic Acid TAT medium pass
XP_010502924.1 Rosmarinic Acid TAT medium pass
XP_010505699.1 Rosmarinic Acid TAT low borderline
XP_010506970.1 Rosmarinic Acid TAT medium pass
XP_010509309.1 Rosmarinic Acid TAT medium pass