PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
XP_010494504.1 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
XP_010501939.1 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
XP_010502464.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_010502465.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_010502466.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_010502467.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_010512079.1 Terpenoid TPS medium pass TPS__00005__sp_A0A140KFG9_TPS1_CAMBE
XP_010514205.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_010514206.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_010514210.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019082746.1 Terpenoid TPS medium pass TPS__00167__sp_Q84ZW8_ACSS_MAIZE
XP_019083544.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
XP_019083545.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
XP_019083713.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
XP_019083719.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019083720.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019085664.1 Terpenoid TPS low borderline TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
XP_019085930.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019086441.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019086516.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019086517.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019087142.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019087143.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019087414.1 Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
XP_019088220.1 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
XP_019089144.1 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
XP_019092625.1 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
XP_019101808.1 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI