Camelina sativa (camelina_sativa)
Imported from atlas release summary for Camelina sativa.
5817
Candidate Protein Records
4681
Pathway-Level Records
11555
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
11555
Family-Level Calls
BAHD
6.33%
C4H
6.22%
C3'H/CYP98A
5.92%
4CL
4.08%
CYP76
4.08%
POD
3.85%
IFS
3.82%
UGT
3.43%
Other Families
62.26%
More Families (96)
UFGT
386
3.34%
7DLGT
378
3.27%
T3O
342
2.96%
NMT
341
2.95%
F3H
314
2.72%
DWF4/CYP90B1
273
2.36%
BR6OX2/CYP85A2
260
2.25%
F3'H/CYP75B
217
1.88%
STR
213
1.84%
SMT1/SMT2/SMT3
211
1.83%
TRI/TRII
184
1.59%
CYP71
178
1.54%
CODM/T6ODM
167
1.45%
SGD
166
1.44%
H6H
165
1.43%
CAS
141
1.22%
T16H
136
1.18%
CAD
136
1.18%
IFR
127
1.1%
BBE
126
1.09%
CSE
120
1.04%
PYKS
100
0.87%
ANR
90
0.78%
LAC
90
0.78%
RAS
84
0.73%
GES
79
0.68%
IO
79
0.68%
SLS
78
0.68%
F5H/CYP84A
78
0.68%
CYP90D1
78
0.68%
TPS
78
0.68%
FNS
73
0.63%
G8O/G8H
70
0.61%
COMT
70
0.61%
TAT
70
0.61%
CCR
69
0.6%
HCT
64
0.55%
GS
62
0.54%
GGPPS
62
0.54%
LAMT
58
0.5%
F3'5'H/CYP75A
57
0.49%
16OMT
51
0.44%
CYP51G1
49
0.42%
MCT/IspD
49
0.42%
CPD/CYP90A1
48
0.42%
8HGO
47
0.41%
PAL
45
0.39%
7DLH
43
0.37%
NCS
42
0.36%
BR6OX1/CYP85A1
39
0.34%
DFR
38
0.33%
CPR
33
0.29%
AACT
32
0.28%
ANS/LDOX
31
0.27%
COR
30
0.26%
PMT
30
0.26%
CNMT
29
0.25%
SQE
28
0.24%
FPPS
28
0.24%
MPO
27
0.23%
ROT3/CYP90C1
24
0.21%
SQS/FDFT1
23
0.2%
MVD
23
0.2%
CHI
21
0.18%
TYDC_DDC
20
0.17%
CCoAOMT
20
0.17%
SMO1/SMO2
20
0.17%
CYP719
19
0.16%
CYP80B1
19
0.16%
MVK
18
0.16%
ADC
15
0.13%
CHS
15
0.13%
DXS
15
0.13%
CYP80F1
14
0.12%
HPPR
14
0.12%
DWF7
14
0.12%
XMT_MXMT_DXMT
11
0.1%
ISY
10
0.09%
DET2
9
0.08%
CMK/IspE
9
0.08%
TDC
8
0.07%
IDI
8
0.07%
HMGR
7
0.06%
DXR
7
0.06%
CPI1
5
0.04%
MDS/IspF
5
0.04%
FLS
4
0.03%
HDS/IspG
4
0.03%
HMGS
4
0.03%
PMK
4
0.03%
DWF1
3
0.03%
HYD1
3
0.03%
DWF5
3
0.03%
FK
3
0.03%
HDR/IspH
3
0.03%
6OMT_4OMT_SOMT
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1387 | 20 | BAHD (609) | View species results |
| Alkaloid pathway | 1089 | 21 | NMT (202) | View species results |
| Phenylpropanoid pathway | 915 | 11 | POD (421) | View species results |
| Flavonoid pathway | 567 | 9 | UFGT (363) | View species results |
| Rosmarinic acid pathway | 366 | 7 | C4H (136) | View species results |
| Steroid pathway | 357 | 14 | SMT1/SMT2/SMT3 (141) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 4417 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 880 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| XP_019083064.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| XP_019083065.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019083066.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019083067.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019083070.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| XP_019083074.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| XP_019083075.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| XP_019090923.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019090925.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019090965.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019093550.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019093755.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019093756.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019093757.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019093758.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019093759.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019093760.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019093761.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019094143.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| XP_019097557.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| XP_019099620.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| XP_019100700.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| XP_019100827.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019100828.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| XP_019101437.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| XP_019101438.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019101439.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019101440.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019101441.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019101442.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| XP_019101443.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| XP_019101444.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019101445.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| XP_019101446.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |