PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

5817
Candidate Protein Records
4681
Pathway-Level Records
11555
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
XP_010513562.1 Phenylpropanoid 4CL medium pass
XP_010514519.1 Phenylpropanoid 4CL low borderline
XP_010514759.1 Phenylpropanoid 4CL medium pass
XP_010515235.1 Phenylpropanoid 4CL medium pass
XP_010516957.1 Phenylpropanoid 4CL low borderline
XP_010518417.1 Phenylpropanoid 4CL low borderline
XP_010518419.1 Phenylpropanoid 4CL low borderline
XP_019083714.1 Phenylpropanoid 4CL medium pass
XP_019084195.1 Phenylpropanoid 4CL medium pass
XP_019087462.1 Phenylpropanoid 4CL low borderline
XP_019087993.1 Phenylpropanoid 4CL medium pass
XP_019090788.1 Phenylpropanoid 4CL medium pass
XP_019090904.1 Phenylpropanoid 4CL medium pass
XP_019090935.1 Phenylpropanoid 4CL medium pass
XP_019091722.1 Phenylpropanoid 4CL medium pass
XP_019091723.1 Phenylpropanoid 4CL medium pass
XP_019094958.1 Phenylpropanoid 4CL medium pass
XP_019094959.1 Phenylpropanoid 4CL medium pass
XP_019095399.1 Phenylpropanoid 4CL medium pass
XP_019095731.1 Phenylpropanoid 4CL medium pass
XP_019097275.1 Phenylpropanoid 4CL medium pass
XP_019097640.1 Phenylpropanoid 4CL medium pass
XP_019097641.1 Phenylpropanoid 4CL medium pass
XP_019097642.1 Phenylpropanoid 4CL medium pass
XP_019099446.1 Phenylpropanoid 4CL low borderline
XP_019099481.1 Phenylpropanoid 4CL medium pass
XP_019101584.1 Phenylpropanoid 4CL medium pass
XP_019101585.1 Phenylpropanoid 4CL medium pass
XP_019102170.1 Phenylpropanoid 4CL low borderline
NP_001289920.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_010412751.2 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010412869.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_010413066.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_010413068.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010413334.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010413500.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010413993.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_010413994.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_010414219.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010414220.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010414263.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010414441.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_010414471.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_010414809.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_010415197.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010415198.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010415200.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010415203.1 Phenylpropanoid C3'H/CYP98A medium borderline
XP_010415594.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_010416312.1 Phenylpropanoid C3'H/CYP98A medium borderline