PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

5817
Candidate Protein Records
4681
Pathway-Level Records
11555
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
XP_010508469.1 Rosmarinic Acid C4H low borderline
XP_010508486.1 Rosmarinic Acid C4H low borderline
XP_010508494.1 Rosmarinic Acid C4H low borderline
XP_010508508.1 Rosmarinic Acid C4H low borderline
XP_010508519.1 Rosmarinic Acid C4H low borderline
XP_010508531.1 Rosmarinic Acid C4H low borderline
XP_010508601.1 Rosmarinic Acid C4H low borderline
XP_010508657.1 Rosmarinic Acid C4H low borderline
XP_010508793.1 Rosmarinic Acid C4H medium pass
XP_010508794.1 Rosmarinic Acid C4H medium pass
XP_010509743.1 Rosmarinic Acid C4H low borderline
XP_010509744.1 Rosmarinic Acid C4H low borderline
XP_010510015.1 Rosmarinic Acid C4H low borderline
XP_010510016.1 Rosmarinic Acid C4H low borderline
XP_010510293.1 Rosmarinic Acid C4H low borderline
XP_010510294.1 Rosmarinic Acid C4H medium pass
XP_010510295.1 Rosmarinic Acid C4H medium pass
XP_010510361.1 Rosmarinic Acid C4H medium pass
XP_010510536.1 Rosmarinic Acid C4H low borderline
XP_010510570.1 Rosmarinic Acid C4H low borderline
XP_010510801.1 Rosmarinic Acid C4H low borderline
XP_010511136.1 Rosmarinic Acid C4H low borderline
XP_010511352.1 Rosmarinic Acid C4H low borderline
XP_010511458.1 Rosmarinic Acid C4H medium pass
XP_010511460.1 Rosmarinic Acid C4H low borderline
XP_010511484.1 Rosmarinic Acid C4H low borderline
XP_010511627.1 Rosmarinic Acid C4H low borderline
XP_010511939.1 Rosmarinic Acid C4H low borderline
XP_010511987.1 Rosmarinic Acid C4H low borderline
XP_010513269.1 Rosmarinic Acid C4H low borderline
XP_010513270.1 Rosmarinic Acid C4H low borderline
XP_010513271.1 Rosmarinic Acid C4H low borderline
XP_010513320.2 Rosmarinic Acid C4H medium pass
XP_010513328.1 Rosmarinic Acid C4H low borderline
XP_010513418.1 Rosmarinic Acid C4H low borderline
XP_010513495.1 Rosmarinic Acid C4H low borderline
XP_010513554.1 Rosmarinic Acid C4H medium pass
XP_010513571.1 Rosmarinic Acid C4H low borderline
XP_010513989.1 Rosmarinic Acid C4H low borderline
XP_010514257.1 Rosmarinic Acid C4H low borderline
XP_010514261.1 Rosmarinic Acid C4H medium pass
XP_010514262.1 Rosmarinic Acid C4H medium pass
XP_010514263.1 Rosmarinic Acid C4H medium pass
XP_010514264.1 Rosmarinic Acid C4H medium pass
XP_010514265.1 Rosmarinic Acid C4H low borderline
XP_010514266.1 Rosmarinic Acid C4H low borderline
XP_010514267.1 Rosmarinic Acid C4H low borderline
XP_010514268.1 Rosmarinic Acid C4H medium pass
XP_010514271.1 Rosmarinic Acid C4H low borderline
XP_010514290.1 Rosmarinic Acid C4H low borderline