PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

5817
Candidate Protein Records
4681
Pathway-Level Records
11555
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
XP_019088300.1 Rosmarinic Acid CPR medium pass
XP_019092517.1 Rosmarinic Acid CPR medium pass
XP_019096816.1 Rosmarinic Acid CPR medium pass
XP_019096817.1 Rosmarinic Acid CPR medium pass
XP_019099367.1 Rosmarinic Acid CPR low borderline
XP_019099368.1 Rosmarinic Acid CPR medium pass
XP_019100269.1 Rosmarinic Acid CPR medium pass
XP_010417783.1 Rosmarinic Acid HPPR medium pass
XP_010430045.1 Rosmarinic Acid HPPR medium pass
XP_010460945.1 Rosmarinic Acid HPPR low borderline
XP_010460946.1 Rosmarinic Acid HPPR low borderline
XP_010473017.1 Rosmarinic Acid HPPR medium pass
XP_010476225.1 Rosmarinic Acid HPPR medium pass
XP_010476226.1 Rosmarinic Acid HPPR medium pass
XP_010478565.1 Rosmarinic Acid HPPR low borderline
XP_010494315.1 Rosmarinic Acid HPPR medium pass
XP_010494324.1 Rosmarinic Acid HPPR medium pass
XP_010506545.1 Rosmarinic Acid HPPR medium pass
XP_010508134.1 Rosmarinic Acid HPPR medium pass
XP_010518184.1 Rosmarinic Acid HPPR medium pass
XP_019094372.1 Rosmarinic Acid HPPR low borderline
XP_010419106.2 Rosmarinic Acid PAL high pass
XP_010426963.1 Rosmarinic Acid PAL high pass
XP_010463700.1 Rosmarinic Acid PAL low borderline
XP_010464706.1 Rosmarinic Acid PAL high pass
XP_010482945.1 Rosmarinic Acid PAL high pass
XP_010485605.1 Rosmarinic Acid PAL low borderline
XP_010501216.1 Rosmarinic Acid PAL low borderline
XP_010504083.1 Rosmarinic Acid PAL high pass
XP_010505261.1 Rosmarinic Acid PAL high pass
XP_010509401.1 Rosmarinic Acid PAL high pass
XP_010513426.1 Rosmarinic Acid PAL medium pass
XP_010515816.1 Rosmarinic Acid PAL high pass
XP_010516949.1 Rosmarinic Acid PAL high pass
XP_019089011.1 Rosmarinic Acid PAL low borderline
XP_019098682.1 Rosmarinic Acid PAL medium pass
XP_010413444.1 Rosmarinic Acid RAS low borderline
XP_010421841.1 Rosmarinic Acid RAS low borderline
XP_010423257.1 Rosmarinic Acid RAS low borderline
XP_010426275.1 Rosmarinic Acid RAS low borderline
XP_010426685.1 Rosmarinic Acid RAS low borderline
XP_010428632.1 Rosmarinic Acid RAS low borderline
XP_010433153.1 Rosmarinic Acid RAS low borderline
XP_010435220.1 Rosmarinic Acid RAS low borderline
XP_010436043.1 Rosmarinic Acid RAS medium pass
XP_010436740.2 Rosmarinic Acid RAS medium pass
XP_010437541.1 Rosmarinic Acid RAS low borderline
XP_010438368.1 Rosmarinic Acid RAS low borderline
XP_010441266.1 Rosmarinic Acid RAS medium pass
XP_010441646.1 Rosmarinic Acid RAS low borderline