PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

5817
Candidate Protein Records
4681
Pathway-Level Records
11555
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
XP_019100462.1 Alkaloid STR low borderline
XP_019100559.1 Alkaloid STR medium pass
XP_019100820.1 Alkaloid STR medium pass
XP_019100821.1 Alkaloid STR low borderline
XP_019101286.1 Alkaloid STR low borderline
XP_019101287.1 Alkaloid STR low borderline
XP_019101420.1 Alkaloid STR low borderline
XP_019101839.1 Alkaloid STR low borderline
XP_019102400.1 Alkaloid STR medium pass
XP_010412628.1 Alkaloid T16H medium borderline
XP_010412869.1 Alkaloid T16H low borderline
XP_010412870.1 Alkaloid T16H medium borderline
XP_010414219.1 Alkaloid T16H medium borderline
XP_010414220.1 Alkaloid T16H medium borderline
XP_010414263.1 Alkaloid T16H medium borderline
XP_010414441.1 Alkaloid T16H medium borderline
XP_010414471.1 Alkaloid T16H medium borderline
XP_010415200.1 Alkaloid T16H medium borderline
XP_010417843.1 Alkaloid T16H medium borderline
XP_010418751.2 Alkaloid T16H medium borderline
XP_010421091.1 Alkaloid T16H medium borderline
XP_010421092.1 Alkaloid T16H medium borderline
XP_010421347.1 Alkaloid T16H medium borderline
XP_010422712.1 Alkaloid T16H medium borderline
XP_010423555.1 Alkaloid T16H medium borderline
XP_010424746.1 Alkaloid T16H medium borderline
XP_010425326.2 Alkaloid T16H medium borderline
XP_010425701.1 Alkaloid T16H medium borderline
XP_010426317.1 Alkaloid T16H medium borderline
XP_010430753.1 Alkaloid T16H medium borderline
XP_010430754.1 Alkaloid T16H medium borderline
XP_010434996.1 Alkaloid T16H medium borderline
XP_010434998.1 Alkaloid T16H medium borderline
XP_010435288.1 Alkaloid T16H medium borderline
XP_010435488.1 Alkaloid T16H medium borderline
XP_010440318.1 Alkaloid T16H medium borderline
XP_010440783.1 Alkaloid T16H medium borderline
XP_010444931.1 Alkaloid T16H medium pass
XP_010449948.1 Alkaloid T16H medium borderline
XP_010450437.1 Alkaloid T16H medium borderline
XP_010451503.1 Alkaloid T16H medium borderline
XP_010452634.2 Alkaloid T16H medium borderline
XP_010454571.1 Alkaloid T16H medium borderline
XP_010456149.1 Alkaloid T16H medium borderline
XP_010456671.1 Alkaloid T16H low borderline
XP_010456684.2 Alkaloid T16H medium borderline
XP_010457143.1 Alkaloid T16H medium borderline
XP_010458565.1 Alkaloid T16H medium borderline
XP_010460641.1 Alkaloid T16H medium borderline
XP_010461906.1 Alkaloid T16H medium borderline